Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS15290 and QEN71_RS15295 are separated by 51 nucleotides QEN71_RS15295 and QEN71_RS15300 are separated by 26 nucleotides QEN71_RS15300 and QEN71_RS15305 are separated by 165 nucleotides QEN71_RS15305 and QEN71_RS15310 overlap by 1 nucleotides
QEN71_RS15290: QEN71_RS15290 - ABC transporter substrate-binding protein, at 3,404,123 to 3,405,139
_RS15290
QEN71_RS15295: QEN71_RS15295 - ABC transporter ATP-binding protein, at 3,405,191 to 3,405,988
_RS15295
QEN71_RS15300: QEN71_RS15300 - ABC transporter permease, at 3,406,015 to 3,406,878
_RS15300
QEN71_RS15305: QEN71_RS15305 - heavy metal response regulator transcription factor, at 3,407,044 to 3,407,721
_RS15305
QEN71_RS15310: QEN71_RS15310 - heavy metal sensor histidine kinase, at 3,407,721 to 3,409,172
_RS15310
Position (kb)
3406
3407 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3405.076 kb on + strand at 3405.077 kb on - strand at 3405.095 kb on + strand at 3405.137 kb on + strand at 3405.240 kb on + strand at 3405.240 kb on + strand at 3405.524 kb on + strand, within QEN71_RS15295 at 3405.872 kb on + strand, within QEN71_RS15295 at 3405.986 kb on + strand at 3405.995 kb on + strand at 3406.020 kb on + strand at 3406.023 kb on + strand at 3406.024 kb on - strand at 3406.024 kb on - strand at 3406.561 kb on + strand, within QEN71_RS15300 at 3406.561 kb on + strand, within QEN71_RS15300 at 3406.822 kb on + strand at 3406.870 kb on - strand at 3406.908 kb on + strand at 3406.908 kb on + strand at 3406.909 kb on - strand at 3406.975 kb on - strand at 3406.975 kb on - strand at 3407.060 kb on + strand at 3407.086 kb on + strand at 3407.154 kb on + strand, within QEN71_RS15305 at 3407.155 kb on - strand, within QEN71_RS15305 at 3407.177 kb on - strand, within QEN71_RS15305 at 3407.177 kb on - strand, within QEN71_RS15305 at 3407.332 kb on + strand, within QEN71_RS15305 at 3407.446 kb on - strand, within QEN71_RS15305 at 3407.598 kb on + strand, within QEN71_RS15305 at 3407.599 kb on - strand, within QEN71_RS15305 at 3407.692 kb on + strand at 3407.693 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 3,405,076 + +0.2 3,405,077 - -0.0 3,405,095 + -0.3 3,405,137 + -0.7 3,405,240 + +0.6 3,405,240 + -0.4 3,405,524 + QEN71_RS15295 0.42 -0.7 3,405,872 + QEN71_RS15295 0.85 +0.3 3,405,986 + -0.3 3,405,995 + +0.7 3,406,020 + -0.5 3,406,023 + +0.6 3,406,024 - -0.6 3,406,024 - +0.0 3,406,561 + QEN71_RS15300 0.63 -1.7 3,406,561 + QEN71_RS15300 0.63 -1.2 3,406,822 + +0.0 3,406,870 - -0.2 3,406,908 + -0.4 3,406,908 + +0.8 3,406,909 - +0.9 3,406,975 - +0.5 3,406,975 - -0.1 3,407,060 + +0.5 3,407,086 + +0.6 3,407,154 + QEN71_RS15305 0.16 -0.7 3,407,155 - QEN71_RS15305 0.16 -0.9 3,407,177 - QEN71_RS15305 0.20 -0.9 3,407,177 - QEN71_RS15305 0.20 -0.2 3,407,332 + QEN71_RS15305 0.42 -1.5 3,407,446 - QEN71_RS15305 0.59 -1.1 3,407,598 + QEN71_RS15305 0.82 -2.1 3,407,599 - QEN71_RS15305 0.82 +1.9 3,407,692 + -0.1 3,407,693 - +0.6
Or see this region's nucleotide sequence