Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS15010 and QEN71_RS15015 are separated by 74 nucleotides QEN71_RS15015 and QEN71_RS15020 are separated by 1 nucleotides QEN71_RS15020 and QEN71_RS15025 are separated by 177 nucleotides
QEN71_RS15010: QEN71_RS15010 - glycosyltransferase family 4 protein, at 3,341,634 to 3,342,704
_RS15010
QEN71_RS15015: QEN71_RS15015 - glycosyltransferase family 9 protein, at 3,342,779 to 3,343,696
_RS15015
QEN71_RS15020: QEN71_RS15020 - glycosyltransferase family 9 protein, at 3,343,698 to 3,344,600
_RS15020
QEN71_RS15025: QEN71_RS15025 - hypothetical protein, at 3,344,778 to 3,345,629
_RS15025
Position (kb)
3343
3344
3345 Strain fitness (log2 ratio)
-1
0
1 at 3342.806 kb on + strand at 3342.806 kb on + strand at 3343.030 kb on - strand, within QEN71_RS15015 at 3343.144 kb on - strand, within QEN71_RS15015 at 3343.407 kb on + strand, within QEN71_RS15015 at 3343.884 kb on - strand, within QEN71_RS15020 at 3344.708 kb on + strand at 3344.709 kb on - strand at 3344.709 kb on - strand at 3344.709 kb on - strand at 3344.803 kb on + strand at 3344.804 kb on - strand at 3345.059 kb on - strand, within QEN71_RS15025 at 3345.213 kb on + strand, within QEN71_RS15025 at 3345.213 kb on + strand, within QEN71_RS15025 at 3345.497 kb on - strand, within QEN71_RS15025 at 3345.504 kb on - strand, within QEN71_RS15025
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 3,342,806 + -0.5 3,342,806 + -1.6 3,343,030 - QEN71_RS15015 0.27 +0.1 3,343,144 - QEN71_RS15015 0.40 +1.5 3,343,407 + QEN71_RS15015 0.68 +0.1 3,343,884 - QEN71_RS15020 0.21 -1.2 3,344,708 + -0.9 3,344,709 - -1.0 3,344,709 - -0.5 3,344,709 - -0.4 3,344,803 + +0.4 3,344,804 - -1.1 3,345,059 - QEN71_RS15025 0.33 -1.4 3,345,213 + QEN71_RS15025 0.51 +0.2 3,345,213 + QEN71_RS15025 0.51 -0.1 3,345,497 - QEN71_RS15025 0.84 -0.5 3,345,504 - QEN71_RS15025 0.85 +1.3
Or see this region's nucleotide sequence