Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS10605 and QEN71_RS10610 are separated by 80 nucleotides QEN71_RS10610 and QEN71_RS10615 are separated by 169 nucleotides
QEN71_RS10605: QEN71_RS10605 - 2OG-Fe(II) oxygenase, at 2,352,625 to 2,353,509
_RS10605
QEN71_RS10610: QEN71_RS10610 - nuclear transport factor 2 family protein, at 2,353,590 to 2,354,063
_RS10610
QEN71_RS10615: QEN71_RS10615 - patatin-like phospholipase family protein, at 2,354,233 to 2,355,516
_RS10615
Position (kb)
2353
2354
2355 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2352.632 kb on + strand at 2352.632 kb on + strand at 2352.632 kb on + strand at 2352.632 kb on + strand at 2352.632 kb on + strand at 2352.633 kb on - strand at 2352.633 kb on - strand at 2352.633 kb on - strand at 2352.633 kb on - strand at 2352.633 kb on - strand at 2352.633 kb on - strand at 2352.737 kb on + strand, within QEN71_RS10605 at 2352.747 kb on - strand, within QEN71_RS10605 at 2352.830 kb on + strand, within QEN71_RS10605 at 2352.830 kb on + strand, within QEN71_RS10605 at 2352.870 kb on + strand, within QEN71_RS10605 at 2352.870 kb on + strand, within QEN71_RS10605 at 2352.870 kb on + strand, within QEN71_RS10605 at 2352.870 kb on + strand, within QEN71_RS10605 at 2352.871 kb on - strand, within QEN71_RS10605 at 2352.871 kb on - strand, within QEN71_RS10605 at 2352.871 kb on - strand, within QEN71_RS10605 at 2352.871 kb on - strand, within QEN71_RS10605 at 2352.871 kb on - strand, within QEN71_RS10605 at 2352.871 kb on - strand, within QEN71_RS10605 at 2352.871 kb on - strand, within QEN71_RS10605 at 2352.871 kb on - strand, within QEN71_RS10605 at 2352.905 kb on + strand, within QEN71_RS10605 at 2352.906 kb on - strand, within QEN71_RS10605 at 2352.941 kb on + strand, within QEN71_RS10605 at 2352.941 kb on + strand, within QEN71_RS10605 at 2352.941 kb on + strand, within QEN71_RS10605 at 2352.941 kb on + strand, within QEN71_RS10605 at 2352.942 kb on - strand, within QEN71_RS10605 at 2352.942 kb on - strand, within QEN71_RS10605 at 2352.942 kb on - strand, within QEN71_RS10605 at 2352.942 kb on - strand, within QEN71_RS10605 at 2352.942 kb on - strand, within QEN71_RS10605 at 2352.942 kb on - strand, within QEN71_RS10605 at 2352.942 kb on - strand, within QEN71_RS10605 at 2353.278 kb on - strand, within QEN71_RS10605 at 2353.283 kb on + strand, within QEN71_RS10605 at 2353.283 kb on + strand, within QEN71_RS10605 at 2353.283 kb on + strand, within QEN71_RS10605 at 2353.283 kb on + strand, within QEN71_RS10605 at 2353.284 kb on - strand, within QEN71_RS10605 at 2353.284 kb on - strand, within QEN71_RS10605 at 2353.284 kb on - strand, within QEN71_RS10605 at 2353.284 kb on - strand, within QEN71_RS10605 at 2353.547 kb on + strand at 2353.547 kb on + strand at 2353.569 kb on + strand at 2353.570 kb on - strand at 2353.580 kb on + strand at 2353.581 kb on - strand at 2353.581 kb on - strand at 2353.816 kb on + strand, within QEN71_RS10610 at 2353.816 kb on + strand, within QEN71_RS10610 at 2353.817 kb on - strand, within QEN71_RS10610 at 2353.817 kb on - strand, within QEN71_RS10610 at 2353.817 kb on - strand, within QEN71_RS10610 at 2353.817 kb on - strand, within QEN71_RS10610 at 2354.027 kb on - strand at 2354.027 kb on - strand at 2354.074 kb on + strand at 2354.074 kb on + strand at 2354.074 kb on + strand at 2354.074 kb on + strand at 2354.074 kb on + strand at 2354.074 kb on + strand at 2354.074 kb on + strand at 2354.074 kb on + strand at 2354.074 kb on + strand at 2354.074 kb on + strand at 2354.075 kb on - strand at 2354.075 kb on - strand at 2354.075 kb on - strand at 2354.075 kb on - strand at 2354.186 kb on + strand at 2354.186 kb on + strand at 2354.186 kb on + strand at 2354.186 kb on + strand at 2354.187 kb on - strand at 2354.187 kb on - strand at 2354.187 kb on - strand at 2354.221 kb on + strand at 2354.221 kb on + strand at 2354.221 kb on + strand at 2354.222 kb on - strand at 2354.222 kb on - strand at 2354.222 kb on - strand at 2354.222 kb on - strand at 2354.222 kb on - strand at 2354.235 kb on - strand at 2354.679 kb on + strand, within QEN71_RS10615 at 2354.680 kb on - strand, within QEN71_RS10615 at 2354.680 kb on - strand, within QEN71_RS10615 at 2354.744 kb on + strand, within QEN71_RS10615 at 2354.843 kb on + strand, within QEN71_RS10615 at 2354.909 kb on + strand, within QEN71_RS10615 at 2354.909 kb on + strand, within QEN71_RS10615 at 2354.909 kb on + strand, within QEN71_RS10615 at 2354.909 kb on - strand, within QEN71_RS10615 at 2354.910 kb on - strand, within QEN71_RS10615 at 2354.960 kb on + strand, within QEN71_RS10615 at 2354.961 kb on - strand, within QEN71_RS10615 at 2354.961 kb on - strand, within QEN71_RS10615
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 2,352,632 + -0.1 2,352,632 + -0.7 2,352,632 + +0.9 2,352,632 + -0.0 2,352,632 + +0.9 2,352,633 - -0.3 2,352,633 - -0.4 2,352,633 - -1.3 2,352,633 - +0.0 2,352,633 - +0.1 2,352,633 - -0.7 2,352,737 + QEN71_RS10605 0.13 -0.6 2,352,747 - QEN71_RS10605 0.14 -0.6 2,352,830 + QEN71_RS10605 0.23 -0.1 2,352,830 + QEN71_RS10605 0.23 +0.1 2,352,870 + QEN71_RS10605 0.28 +0.5 2,352,870 + QEN71_RS10605 0.28 +0.3 2,352,870 + QEN71_RS10605 0.28 -1.4 2,352,870 + QEN71_RS10605 0.28 -0.5 2,352,871 - QEN71_RS10605 0.28 -0.1 2,352,871 - QEN71_RS10605 0.28 -0.4 2,352,871 - QEN71_RS10605 0.28 -1.2 2,352,871 - QEN71_RS10605 0.28 +1.6 2,352,871 - QEN71_RS10605 0.28 -0.7 2,352,871 - QEN71_RS10605 0.28 -0.4 2,352,871 - QEN71_RS10605 0.28 +0.1 2,352,871 - QEN71_RS10605 0.28 -1.6 2,352,905 + QEN71_RS10605 0.32 -0.3 2,352,906 - QEN71_RS10605 0.32 +0.0 2,352,941 + QEN71_RS10605 0.36 +0.4 2,352,941 + QEN71_RS10605 0.36 +0.1 2,352,941 + QEN71_RS10605 0.36 -2.8 2,352,941 + QEN71_RS10605 0.36 -0.7 2,352,942 - QEN71_RS10605 0.36 -1.0 2,352,942 - QEN71_RS10605 0.36 +0.9 2,352,942 - QEN71_RS10605 0.36 +0.2 2,352,942 - QEN71_RS10605 0.36 -0.5 2,352,942 - QEN71_RS10605 0.36 -0.9 2,352,942 - QEN71_RS10605 0.36 -1.2 2,352,942 - QEN71_RS10605 0.36 +0.9 2,353,278 - QEN71_RS10605 0.74 -0.2 2,353,283 + QEN71_RS10605 0.74 -0.1 2,353,283 + QEN71_RS10605 0.74 -0.9 2,353,283 + QEN71_RS10605 0.74 +0.7 2,353,283 + QEN71_RS10605 0.74 +0.5 2,353,284 - QEN71_RS10605 0.74 -1.0 2,353,284 - QEN71_RS10605 0.74 +0.6 2,353,284 - QEN71_RS10605 0.74 +0.1 2,353,284 - QEN71_RS10605 0.74 -0.8 2,353,547 + -0.5 2,353,547 + -0.1 2,353,569 + +0.6 2,353,570 - -1.3 2,353,580 + +0.4 2,353,581 - -0.2 2,353,581 - -0.6 2,353,816 + QEN71_RS10610 0.48 -0.1 2,353,816 + QEN71_RS10610 0.48 +0.1 2,353,817 - QEN71_RS10610 0.48 +0.5 2,353,817 - QEN71_RS10610 0.48 -1.3 2,353,817 - QEN71_RS10610 0.48 -3.2 2,353,817 - QEN71_RS10610 0.48 -0.3 2,354,027 - -0.3 2,354,027 - -2.4 2,354,074 + -0.1 2,354,074 + +0.2 2,354,074 + +0.6 2,354,074 + +0.2 2,354,074 + -0.6 2,354,074 + -1.4 2,354,074 + +0.7 2,354,074 + +0.5 2,354,074 + -1.3 2,354,074 + -0.0 2,354,075 - +0.2 2,354,075 - +0.1 2,354,075 - -1.4 2,354,075 - -0.6 2,354,186 + -0.1 2,354,186 + +0.6 2,354,186 + -0.2 2,354,186 + -1.3 2,354,187 - +0.2 2,354,187 - +1.0 2,354,187 - +0.5 2,354,221 + -0.3 2,354,221 + +0.2 2,354,221 + -1.6 2,354,222 - +0.9 2,354,222 - +1.0 2,354,222 - -0.5 2,354,222 - +1.1 2,354,222 - +0.2 2,354,235 - -0.7 2,354,679 + QEN71_RS10615 0.35 -0.6 2,354,680 - QEN71_RS10615 0.35 -0.4 2,354,680 - QEN71_RS10615 0.35 -1.6 2,354,744 + QEN71_RS10615 0.40 +0.7 2,354,843 + QEN71_RS10615 0.48 -0.2 2,354,909 + QEN71_RS10615 0.53 -0.7 2,354,909 + QEN71_RS10615 0.53 +0.6 2,354,909 + QEN71_RS10615 0.53 +1.4 2,354,909 - QEN71_RS10615 0.53 +1.0 2,354,910 - QEN71_RS10615 0.53 +0.0 2,354,960 + QEN71_RS10615 0.57 -0.1 2,354,961 - QEN71_RS10615 0.57 -0.0 2,354,961 - QEN71_RS10615 0.57 +0.2
Or see this region's nucleotide sequence