Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS04650 and QEN71_RS04655 are separated by 45 nucleotides QEN71_RS04655 and QEN71_RS04660 are separated by 351 nucleotides QEN71_RS04660 and QEN71_RS04665 are separated by 109 nucleotides
QEN71_RS04650: QEN71_RS04650 - hypothetical protein, at 1,018,376 to 1,018,549
_RS04650
QEN71_RS04655: QEN71_RS04655 - elongation factor P, at 1,018,595 to 1,019,152
_RS04655
QEN71_RS04660: QEN71_RS04660 - elongation factor P maturation arginine rhamnosyltransferase EarP, at 1,019,504 to 1,020,685
_RS04660
QEN71_RS04665: QEN71_RS04665 - excinuclease ABC subunit UvrC, at 1,020,795 to 1,023,005
_RS04665
Position (kb)
1019
1020
1021 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1018.534 kb on - strand at 1018.534 kb on - strand at 1018.565 kb on - strand at 1018.565 kb on - strand at 1018.597 kb on - strand at 1018.597 kb on - strand at 1019.166 kb on - strand at 1019.173 kb on - strand at 1019.173 kb on - strand at 1019.173 kb on - strand at 1019.173 kb on - strand at 1019.173 kb on - strand at 1019.173 kb on - strand at 1019.173 kb on - strand at 1019.173 kb on - strand at 1019.203 kb on - strand at 1019.203 kb on - strand at 1019.210 kb on - strand at 1019.210 kb on - strand at 1019.210 kb on - strand at 1019.402 kb on - strand at 1019.402 kb on - strand at 1019.402 kb on - strand at 1019.402 kb on - strand at 1019.402 kb on - strand at 1019.510 kb on + strand at 1020.725 kb on - strand at 1020.725 kb on - strand at 1020.725 kb on - strand at 1020.725 kb on - strand at 1020.725 kb on - strand at 1020.725 kb on - strand at 1020.738 kb on + strand at 1020.738 kb on + strand at 1020.738 kb on + strand at 1020.739 kb on - strand at 1020.739 kb on - strand at 1020.739 kb on - strand at 1020.739 kb on - strand at 1020.767 kb on + strand at 1020.942 kb on + strand at 1020.942 kb on + strand at 1020.942 kb on + strand at 1020.943 kb on - strand at 1020.943 kb on - strand at 1020.948 kb on + strand at 1020.948 kb on + strand at 1020.948 kb on + strand at 1020.949 kb on - strand at 1020.949 kb on - strand at 1020.949 kb on - strand at 1020.951 kb on + strand at 1020.951 kb on + strand at 1020.951 kb on + strand at 1020.951 kb on + strand at 1020.952 kb on - strand at 1020.952 kb on - strand at 1020.952 kb on - strand at 1020.952 kb on - strand at 1020.975 kb on + strand at 1020.975 kb on + strand at 1020.975 kb on + strand at 1020.976 kb on - strand at 1021.017 kb on + strand, within QEN71_RS04665 at 1021.017 kb on + strand, within QEN71_RS04665 at 1021.017 kb on + strand, within QEN71_RS04665 at 1021.017 kb on + strand, within QEN71_RS04665 at 1021.018 kb on - strand, within QEN71_RS04665 at 1021.018 kb on - strand, within QEN71_RS04665 at 1021.018 kb on - strand, within QEN71_RS04665 at 1021.018 kb on - strand, within QEN71_RS04665 at 1021.018 kb on - strand, within QEN71_RS04665 at 1021.155 kb on + strand, within QEN71_RS04665 at 1021.156 kb on - strand, within QEN71_RS04665 at 1021.156 kb on - strand, within QEN71_RS04665 at 1021.191 kb on + strand, within QEN71_RS04665 at 1021.191 kb on + strand, within QEN71_RS04665 at 1021.192 kb on - strand, within QEN71_RS04665 at 1021.192 kb on - strand, within QEN71_RS04665 at 1021.230 kb on + strand, within QEN71_RS04665 at 1021.230 kb on + strand, within QEN71_RS04665 at 1021.230 kb on + strand, within QEN71_RS04665 at 1021.230 kb on + strand, within QEN71_RS04665 at 1021.230 kb on + strand, within QEN71_RS04665 at 1021.230 kb on + strand, within QEN71_RS04665 at 1021.230 kb on + strand, within QEN71_RS04665 at 1021.231 kb on - strand, within QEN71_RS04665 at 1021.231 kb on - strand, within QEN71_RS04665 at 1021.231 kb on - strand, within QEN71_RS04665 at 1021.231 kb on - strand, within QEN71_RS04665 at 1021.231 kb on - strand, within QEN71_RS04665 at 1021.234 kb on - strand, within QEN71_RS04665 at 1021.263 kb on + strand, within QEN71_RS04665 at 1021.263 kb on + strand, within QEN71_RS04665 at 1021.263 kb on + strand, within QEN71_RS04665 at 1021.263 kb on + strand, within QEN71_RS04665 at 1021.263 kb on + strand, within QEN71_RS04665 at 1021.263 kb on + strand, within QEN71_RS04665 at 1021.263 kb on + strand, within QEN71_RS04665 at 1021.358 kb on + strand, within QEN71_RS04665 at 1021.358 kb on + strand, within QEN71_RS04665 at 1021.359 kb on - strand, within QEN71_RS04665 at 1021.359 kb on - strand, within QEN71_RS04665 at 1021.440 kb on + strand, within QEN71_RS04665 at 1021.440 kb on + strand, within QEN71_RS04665 at 1021.441 kb on - strand, within QEN71_RS04665 at 1021.441 kb on - strand, within QEN71_RS04665 at 1021.441 kb on - strand, within QEN71_RS04665 at 1021.441 kb on - strand, within QEN71_RS04665
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 1,018,534 - -0.5 1,018,534 - -0.8 1,018,565 - -1.8 1,018,565 - +0.3 1,018,597 - +0.9 1,018,597 - +1.5 1,019,166 - -0.1 1,019,173 - +0.9 1,019,173 - -0.8 1,019,173 - +2.0 1,019,173 - +0.5 1,019,173 - +1.6 1,019,173 - -0.4 1,019,173 - +2.0 1,019,173 - +0.7 1,019,203 - +1.3 1,019,203 - +1.0 1,019,210 - +0.0 1,019,210 - -1.0 1,019,210 - -0.9 1,019,402 - -0.5 1,019,402 - -0.1 1,019,402 - -0.5 1,019,402 - +0.2 1,019,402 - -0.6 1,019,510 + -0.3 1,020,725 - +0.2 1,020,725 - -0.0 1,020,725 - -1.2 1,020,725 - -0.0 1,020,725 - -0.8 1,020,725 - +0.3 1,020,738 + +0.4 1,020,738 + -0.2 1,020,738 + -1.4 1,020,739 - -0.1 1,020,739 - -0.0 1,020,739 - +0.0 1,020,739 - +0.2 1,020,767 + -0.1 1,020,942 + -1.3 1,020,942 + -1.8 1,020,942 + +1.7 1,020,943 - +1.7 1,020,943 - -2.2 1,020,948 + -0.0 1,020,948 + -1.0 1,020,948 + -1.8 1,020,949 - +0.2 1,020,949 - +1.0 1,020,949 - -0.3 1,020,951 + -0.3 1,020,951 + -1.1 1,020,951 + -0.3 1,020,951 + -0.0 1,020,952 - -0.8 1,020,952 - -1.0 1,020,952 - -0.6 1,020,952 - +0.4 1,020,975 + -1.8 1,020,975 + -0.4 1,020,975 + -2.6 1,020,976 - -1.0 1,021,017 + QEN71_RS04665 0.10 -1.2 1,021,017 + QEN71_RS04665 0.10 +0.1 1,021,017 + QEN71_RS04665 0.10 +0.0 1,021,017 + QEN71_RS04665 0.10 +1.4 1,021,018 - QEN71_RS04665 0.10 -0.0 1,021,018 - QEN71_RS04665 0.10 -0.0 1,021,018 - QEN71_RS04665 0.10 -0.9 1,021,018 - QEN71_RS04665 0.10 -1.3 1,021,018 - QEN71_RS04665 0.10 -1.3 1,021,155 + QEN71_RS04665 0.16 -0.0 1,021,156 - QEN71_RS04665 0.16 +0.7 1,021,156 - QEN71_RS04665 0.16 -0.6 1,021,191 + QEN71_RS04665 0.18 +0.2 1,021,191 + QEN71_RS04665 0.18 -3.3 1,021,192 - QEN71_RS04665 0.18 -1.3 1,021,192 - QEN71_RS04665 0.18 -0.6 1,021,230 + QEN71_RS04665 0.20 -0.6 1,021,230 + QEN71_RS04665 0.20 +0.7 1,021,230 + QEN71_RS04665 0.20 -0.0 1,021,230 + QEN71_RS04665 0.20 -1.2 1,021,230 + QEN71_RS04665 0.20 -0.0 1,021,230 + QEN71_RS04665 0.20 -0.9 1,021,230 + QEN71_RS04665 0.20 -0.2 1,021,231 - QEN71_RS04665 0.20 +0.4 1,021,231 - QEN71_RS04665 0.20 -0.3 1,021,231 - QEN71_RS04665 0.20 -0.3 1,021,231 - QEN71_RS04665 0.20 +1.0 1,021,231 - QEN71_RS04665 0.20 -1.6 1,021,234 - QEN71_RS04665 0.20 +1.0 1,021,263 + QEN71_RS04665 0.21 -0.3 1,021,263 + QEN71_RS04665 0.21 -1.9 1,021,263 + QEN71_RS04665 0.21 +2.0 1,021,263 + QEN71_RS04665 0.21 +0.9 1,021,263 + QEN71_RS04665 0.21 +1.7 1,021,263 + QEN71_RS04665 0.21 -1.3 1,021,263 + QEN71_RS04665 0.21 +0.8 1,021,358 + QEN71_RS04665 0.25 +1.2 1,021,358 + QEN71_RS04665 0.25 +0.5 1,021,359 - QEN71_RS04665 0.26 -0.3 1,021,359 - QEN71_RS04665 0.26 -0.8 1,021,440 + QEN71_RS04665 0.29 +0.1 1,021,440 + QEN71_RS04665 0.29 +1.3 1,021,441 - QEN71_RS04665 0.29 +1.6 1,021,441 - QEN71_RS04665 0.29 -1.2 1,021,441 - QEN71_RS04665 0.29 -0.1 1,021,441 - QEN71_RS04665 0.29 +0.7
Or see this region's nucleotide sequence