Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS03920 and QEN71_RS03925 are separated by 156 nucleotides QEN71_RS03925 and QEN71_RS03930 are separated by 394 nucleotides QEN71_RS03930 and QEN71_RS03935 are separated by 96 nucleotides
QEN71_RS03920: QEN71_RS03920 - xanthine dehydrogenase small subunit, at 866,315 to 867,856
_RS03920
QEN71_RS03925: QEN71_RS03925 - hypothetical protein, at 868,013 to 868,243
_RS03925
QEN71_RS03930: QEN71_RS03930 - disulfide bond formation protein B, at 868,638 to 869,144
_RS03930
QEN71_RS03935: QEN71_RS03935 - amidase, at 869,241 to 870,629
_RS03935
Position (kb) 868
869
870 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 867.831 kb on + strand at 867.831 kb on + strand at 867.831 kb on + strand at 867.831 kb on + strand at 867.831 kb on + strand at 867.831 kb on + strand at 867.831 kb on + strand at 867.831 kb on + strand at 867.831 kb on + strand at 867.831 kb on + strand at 867.832 kb on - strand at 867.832 kb on - strand at 867.832 kb on - strand at 867.832 kb on - strand at 867.832 kb on - strand at 867.832 kb on - strand at 867.832 kb on - strand at 867.832 kb on - strand at 867.832 kb on - strand at 867.893 kb on + strand at 867.893 kb on + strand at 867.894 kb on - strand at 867.894 kb on - strand at 867.911 kb on + strand at 867.929 kb on + strand at 867.929 kb on + strand at 867.929 kb on + strand at 867.930 kb on - strand at 867.930 kb on - strand at 867.930 kb on - strand at 867.930 kb on - strand at 867.930 kb on - strand at 867.953 kb on + strand at 867.953 kb on + strand at 867.953 kb on + strand at 867.953 kb on + strand at 867.953 kb on + strand at 867.953 kb on + strand at 867.953 kb on + strand at 867.954 kb on - strand at 867.954 kb on - strand at 867.954 kb on - strand at 867.954 kb on - strand at 867.954 kb on - strand at 867.954 kb on - strand at 867.954 kb on - strand at 867.975 kb on + strand at 867.998 kb on + strand at 867.998 kb on + strand at 867.998 kb on + strand at 867.998 kb on + strand at 867.998 kb on + strand at 867.998 kb on + strand at 867.999 kb on - strand at 867.999 kb on - strand at 867.999 kb on - strand at 867.999 kb on - strand at 867.999 kb on - strand at 867.999 kb on - strand at 868.081 kb on - strand, within QEN71_RS03925 at 868.081 kb on - strand, within QEN71_RS03925 at 868.081 kb on - strand, within QEN71_RS03925 at 868.242 kb on - strand at 868.242 kb on - strand at 868.347 kb on - strand at 868.347 kb on - strand at 868.347 kb on - strand at 868.347 kb on - strand at 868.405 kb on + strand at 868.405 kb on + strand at 868.432 kb on - strand at 868.656 kb on - strand at 868.772 kb on + strand, within QEN71_RS03930 at 868.773 kb on - strand, within QEN71_RS03930 at 868.773 kb on - strand, within QEN71_RS03930 at 868.773 kb on - strand, within QEN71_RS03930 at 868.773 kb on - strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.867 kb on + strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.868 kb on - strand, within QEN71_RS03930 at 868.999 kb on + strand, within QEN71_RS03930 at 868.999 kb on + strand, within QEN71_RS03930 at 868.999 kb on + strand, within QEN71_RS03930 at 869.000 kb on - strand, within QEN71_RS03930 at 869.053 kb on + strand, within QEN71_RS03930 at 869.053 kb on + strand, within QEN71_RS03930 at 869.053 kb on + strand, within QEN71_RS03930 at 869.053 kb on + strand, within QEN71_RS03930 at 869.053 kb on + strand, within QEN71_RS03930 at 869.053 kb on + strand, within QEN71_RS03930 at 869.053 kb on + strand, within QEN71_RS03930 at 869.053 kb on + strand, within QEN71_RS03930 at 869.054 kb on - strand, within QEN71_RS03930 at 869.054 kb on - strand, within QEN71_RS03930 at 869.094 kb on + strand at 869.094 kb on + strand at 869.095 kb on - strand at 869.126 kb on + strand at 869.126 kb on + strand at 869.126 kb on + strand at 869.127 kb on - strand at 869.127 kb on - strand at 869.127 kb on - strand at 869.138 kb on + strand at 869.154 kb on - strand at 869.243 kb on - strand at 869.252 kb on + strand at 869.252 kb on + strand at 869.252 kb on + strand at 869.252 kb on + strand at 869.252 kb on + strand at 869.252 kb on + strand at 869.253 kb on - strand at 869.253 kb on - strand at 869.253 kb on - strand at 869.253 kb on - strand at 869.253 kb on - strand at 869.280 kb on + strand at 869.281 kb on - strand at 869.572 kb on + strand, within QEN71_RS03935 at 869.573 kb on - strand, within QEN71_RS03935 at 869.573 kb on - strand, within QEN71_RS03935 at 869.573 kb on - strand, within QEN71_RS03935 at 869.573 kb on - strand, within QEN71_RS03935 at 869.629 kb on + strand, within QEN71_RS03935 at 869.629 kb on + strand, within QEN71_RS03935 at 869.629 kb on + strand, within QEN71_RS03935 at 869.630 kb on - strand, within QEN71_RS03935 at 869.630 kb on - strand, within QEN71_RS03935 at 869.671 kb on + strand, within QEN71_RS03935 at 869.671 kb on + strand, within QEN71_RS03935 at 869.671 kb on + strand, within QEN71_RS03935 at 869.671 kb on + strand, within QEN71_RS03935 at 869.788 kb on + strand, within QEN71_RS03935 at 869.788 kb on + strand, within QEN71_RS03935 at 869.788 kb on + strand, within QEN71_RS03935 at 869.788 kb on + strand, within QEN71_RS03935 at 869.789 kb on - strand, within QEN71_RS03935 at 869.789 kb on - strand, within QEN71_RS03935 at 869.789 kb on - strand, within QEN71_RS03935 at 869.789 kb on - strand, within QEN71_RS03935 at 869.789 kb on - strand, within QEN71_RS03935 at 869.789 kb on - strand, within QEN71_RS03935 at 869.789 kb on - strand, within QEN71_RS03935 at 869.827 kb on + strand, within QEN71_RS03935 at 869.827 kb on + strand, within QEN71_RS03935 at 869.827 kb on + strand, within QEN71_RS03935 at 869.827 kb on + strand, within QEN71_RS03935 at 869.827 kb on + strand, within QEN71_RS03935 at 869.827 kb on + strand, within QEN71_RS03935 at 869.828 kb on - strand, within QEN71_RS03935 at 869.828 kb on - strand, within QEN71_RS03935 at 869.828 kb on - strand, within QEN71_RS03935 at 869.828 kb on - strand, within QEN71_RS03935 at 869.828 kb on - strand, within QEN71_RS03935 at 869.828 kb on - strand, within QEN71_RS03935
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 867,831 + -1.0 867,831 + -0.2 867,831 + -0.4 867,831 + -1.4 867,831 + +0.2 867,831 + -1.4 867,831 + -0.7 867,831 + +1.2 867,831 + +0.9 867,831 + +0.7 867,832 - +0.6 867,832 - -0.8 867,832 - +1.3 867,832 - +0.4 867,832 - +0.2 867,832 - +0.1 867,832 - -0.5 867,832 - +0.1 867,832 - -0.4 867,893 + +0.4 867,893 + -0.4 867,894 - -0.7 867,894 - -0.4 867,911 + -0.2 867,929 + -1.8 867,929 + +0.2 867,929 + -1.3 867,930 - -0.1 867,930 - +1.6 867,930 - +0.1 867,930 - +0.5 867,930 - +1.5 867,953 + +0.5 867,953 + -1.2 867,953 + +1.2 867,953 + -0.4 867,953 + -0.0 867,953 + +0.6 867,953 + +0.2 867,954 - -0.7 867,954 - -0.9 867,954 - -0.0 867,954 - +0.1 867,954 - +0.8 867,954 - -0.3 867,954 - +0.5 867,975 + +0.0 867,998 + +0.2 867,998 + -0.3 867,998 + +0.8 867,998 + -1.2 867,998 + -0.2 867,998 + -0.8 867,999 - -0.9 867,999 - -1.7 867,999 - -0.4 867,999 - +0.0 867,999 - -0.0 867,999 - -0.0 868,081 - QEN71_RS03925 0.29 +0.2 868,081 - QEN71_RS03925 0.29 +0.6 868,081 - QEN71_RS03925 0.29 +0.8 868,242 - +0.4 868,242 - -1.8 868,347 - -0.2 868,347 - -0.0 868,347 - -1.2 868,347 - +0.5 868,405 + -0.1 868,405 + +1.0 868,432 - -0.6 868,656 - -0.2 868,772 + QEN71_RS03930 0.26 -2.4 868,773 - QEN71_RS03930 0.27 -0.3 868,773 - QEN71_RS03930 0.27 +0.1 868,773 - QEN71_RS03930 0.27 -2.2 868,773 - QEN71_RS03930 0.27 -0.0 868,867 + QEN71_RS03930 0.45 -1.9 868,867 + QEN71_RS03930 0.45 +1.2 868,867 + QEN71_RS03930 0.45 +0.1 868,867 + QEN71_RS03930 0.45 -1.5 868,867 + QEN71_RS03930 0.45 -0.2 868,867 + QEN71_RS03930 0.45 +0.7 868,867 + QEN71_RS03930 0.45 -2.4 868,867 + QEN71_RS03930 0.45 -1.3 868,867 + QEN71_RS03930 0.45 -1.6 868,867 + QEN71_RS03930 0.45 -2.4 868,867 + QEN71_RS03930 0.45 +0.8 868,867 + QEN71_RS03930 0.45 -0.9 868,867 + QEN71_RS03930 0.45 -1.1 868,867 + QEN71_RS03930 0.45 -0.9 868,867 + QEN71_RS03930 0.45 -0.4 868,867 + QEN71_RS03930 0.45 +1.2 868,867 + QEN71_RS03930 0.45 -1.0 868,867 + QEN71_RS03930 0.45 -0.0 868,867 + QEN71_RS03930 0.45 +0.1 868,867 + QEN71_RS03930 0.45 -1.4 868,867 + QEN71_RS03930 0.45 -1.1 868,867 + QEN71_RS03930 0.45 -1.3 868,867 + QEN71_RS03930 0.45 -0.7 868,867 + QEN71_RS03930 0.45 -2.9 868,867 + QEN71_RS03930 0.45 -2.5 868,867 + QEN71_RS03930 0.45 -0.8 868,868 - QEN71_RS03930 0.45 -2.0 868,868 - QEN71_RS03930 0.45 -1.9 868,868 - QEN71_RS03930 0.45 -1.9 868,868 - QEN71_RS03930 0.45 -1.6 868,868 - QEN71_RS03930 0.45 -1.8 868,868 - QEN71_RS03930 0.45 -0.8 868,868 - QEN71_RS03930 0.45 -0.0 868,868 - QEN71_RS03930 0.45 -2.3 868,868 - QEN71_RS03930 0.45 -0.8 868,868 - QEN71_RS03930 0.45 -2.1 868,868 - QEN71_RS03930 0.45 -1.1 868,868 - QEN71_RS03930 0.45 -0.7 868,868 - QEN71_RS03930 0.45 -1.5 868,868 - QEN71_RS03930 0.45 -1.3 868,868 - QEN71_RS03930 0.45 -2.8 868,868 - QEN71_RS03930 0.45 -1.6 868,868 - QEN71_RS03930 0.45 +1.4 868,868 - QEN71_RS03930 0.45 -0.0 868,868 - QEN71_RS03930 0.45 +0.4 868,868 - QEN71_RS03930 0.45 -1.3 868,868 - QEN71_RS03930 0.45 -0.4 868,999 + QEN71_RS03930 0.71 -1.9 868,999 + QEN71_RS03930 0.71 +0.4 868,999 + QEN71_RS03930 0.71 -0.8 869,000 - QEN71_RS03930 0.71 +0.4 869,053 + QEN71_RS03930 0.82 -0.6 869,053 + QEN71_RS03930 0.82 -0.9 869,053 + QEN71_RS03930 0.82 -2.7 869,053 + QEN71_RS03930 0.82 -0.8 869,053 + QEN71_RS03930 0.82 -2.4 869,053 + QEN71_RS03930 0.82 -1.6 869,053 + QEN71_RS03930 0.82 -1.0 869,053 + QEN71_RS03930 0.82 -0.3 869,054 - QEN71_RS03930 0.82 -0.8 869,054 - QEN71_RS03930 0.82 -0.3 869,094 + -0.4 869,094 + -0.6 869,095 - -0.7 869,126 + +1.0 869,126 + -0.4 869,126 + -1.0 869,127 - -1.1 869,127 - -0.8 869,127 - +0.9 869,138 + -0.7 869,154 - +0.5 869,243 - +1.3 869,252 + -0.4 869,252 + -0.3 869,252 + -0.5 869,252 + -0.3 869,252 + +2.0 869,252 + +0.0 869,253 - +0.4 869,253 - +2.3 869,253 - +0.1 869,253 - +0.6 869,253 - -0.5 869,280 + -1.0 869,281 - +0.0 869,572 + QEN71_RS03935 0.24 -0.0 869,573 - QEN71_RS03935 0.24 +1.2 869,573 - QEN71_RS03935 0.24 -1.1 869,573 - QEN71_RS03935 0.24 -0.6 869,573 - QEN71_RS03935 0.24 -0.7 869,629 + QEN71_RS03935 0.28 -0.9 869,629 + QEN71_RS03935 0.28 +0.4 869,629 + QEN71_RS03935 0.28 -0.1 869,630 - QEN71_RS03935 0.28 +0.1 869,630 - QEN71_RS03935 0.28 -0.6 869,671 + QEN71_RS03935 0.31 -1.3 869,671 + QEN71_RS03935 0.31 -0.7 869,671 + QEN71_RS03935 0.31 -0.0 869,671 + QEN71_RS03935 0.31 +0.1 869,788 + QEN71_RS03935 0.39 -0.7 869,788 + QEN71_RS03935 0.39 +0.1 869,788 + QEN71_RS03935 0.39 +0.4 869,788 + QEN71_RS03935 0.39 +0.4 869,789 - QEN71_RS03935 0.39 -1.7 869,789 - QEN71_RS03935 0.39 +0.2 869,789 - QEN71_RS03935 0.39 -0.3 869,789 - QEN71_RS03935 0.39 -0.1 869,789 - QEN71_RS03935 0.39 -0.0 869,789 - QEN71_RS03935 0.39 -0.6 869,789 - QEN71_RS03935 0.39 -0.0 869,827 + QEN71_RS03935 0.42 -0.3 869,827 + QEN71_RS03935 0.42 -0.8 869,827 + QEN71_RS03935 0.42 -0.3 869,827 + QEN71_RS03935 0.42 -0.7 869,827 + QEN71_RS03935 0.42 -1.0 869,827 + QEN71_RS03935 0.42 +0.3 869,828 - QEN71_RS03935 0.42 -0.2 869,828 - QEN71_RS03935 0.42 -0.1 869,828 - QEN71_RS03935 0.42 -0.3 869,828 - QEN71_RS03935 0.42 -0.3 869,828 - QEN71_RS03935 0.42 -2.5 869,828 - QEN71_RS03935 0.42 -0.2
Or see this region's nucleotide sequence