Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS01235 and QEN71_RS01240 are separated by 521 nucleotides QEN71_RS01240 and QEN71_RS01245 are separated by 135 nucleotides QEN71_RS01245 and QEN71_RS01250 are separated by 42 nucleotides QEN71_RS01250 and QEN71_RS01255 are separated by 40 nucleotides
QEN71_RS01235: QEN71_RS01235 - transcriptional regulator, at 281,413 to 282,159
_RS01235
QEN71_RS01240: QEN71_RS01240 - acyl-ACP desaturase, at 282,681 to 283,553
_RS01240
QEN71_RS01245: QEN71_RS01245 - D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase, at 283,689 to 284,171
_RS01245
QEN71_RS01250: QEN71_RS01250 - hypothetical protein, at 284,214 to 284,450
_RS01250
QEN71_RS01255: QEN71_RS01255 - type III pantothenate kinase, at 284,491 to 285,345
_RS01255
Position (kb) 282
283
284 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 282.199 kb on + strand at 282.199 kb on + strand at 282.199 kb on + strand at 282.199 kb on + strand at 282.199 kb on + strand at 282.199 kb on + strand at 282.199 kb on + strand at 282.199 kb on + strand at 282.200 kb on - strand at 282.200 kb on - strand at 282.200 kb on - strand at 282.263 kb on + strand at 282.263 kb on + strand at 282.263 kb on + strand at 282.307 kb on + strand at 282.307 kb on + strand at 282.307 kb on + strand at 282.307 kb on + strand at 282.307 kb on + strand at 282.307 kb on + strand at 282.308 kb on - strand at 282.308 kb on - strand at 282.308 kb on - strand at 282.308 kb on - strand at 282.308 kb on - strand at 282.310 kb on + strand at 282.310 kb on + strand at 282.310 kb on + strand at 282.310 kb on + strand at 282.310 kb on + strand at 282.310 kb on + strand at 282.310 kb on + strand at 282.310 kb on + strand at 282.310 kb on + strand at 282.311 kb on - strand at 282.311 kb on - strand at 282.311 kb on - strand at 282.311 kb on - strand at 282.311 kb on - strand at 282.311 kb on - strand at 282.311 kb on - strand at 282.311 kb on - strand at 282.311 kb on - strand at 282.311 kb on - strand at 282.317 kb on + strand at 282.317 kb on + strand at 282.317 kb on + strand at 282.318 kb on - strand at 282.522 kb on + strand at 282.522 kb on + strand at 282.567 kb on + strand at 282.568 kb on - strand at 282.629 kb on + strand at 282.629 kb on + strand at 282.629 kb on + strand at 282.629 kb on + strand at 282.629 kb on + strand at 282.632 kb on + strand at 282.632 kb on + strand at 282.632 kb on + strand at 282.632 kb on + strand at 282.632 kb on + strand at 282.632 kb on + strand at 282.632 kb on + strand at 282.632 kb on + strand at 282.644 kb on + strand at 282.644 kb on + strand at 282.644 kb on + strand at 282.644 kb on + strand at 282.644 kb on + strand at 282.644 kb on + strand at 282.644 kb on + strand at 282.644 kb on + strand at 282.644 kb on + strand at 282.696 kb on + strand at 282.708 kb on + strand at 283.131 kb on + strand, within QEN71_RS01240 at 283.131 kb on + strand, within QEN71_RS01240 at 283.131 kb on + strand, within QEN71_RS01240 at 283.131 kb on + strand, within QEN71_RS01240 at 283.173 kb on + strand, within QEN71_RS01240 at 283.182 kb on + strand, within QEN71_RS01240 at 283.182 kb on + strand, within QEN71_RS01240 at 283.577 kb on + strand at 283.577 kb on + strand at 283.577 kb on + strand at 283.577 kb on + strand at 283.577 kb on + strand at 283.577 kb on + strand at 283.577 kb on + strand at 283.578 kb on - strand at 283.578 kb on - strand at 283.578 kb on - strand at 283.676 kb on + strand at 283.676 kb on + strand at 283.676 kb on + strand at 283.676 kb on + strand at 283.676 kb on + strand at 284.216 kb on - strand at 284.437 kb on - strand at 284.474 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.476 kb on + strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand at 284.477 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 282,199 + +3.0 282,199 + -0.5 282,199 + -0.3 282,199 + +0.3 282,199 + +0.8 282,199 + -0.1 282,199 + -0.0 282,199 + +0.5 282,200 - +1.0 282,200 - +0.3 282,200 - -0.4 282,263 + -0.3 282,263 + +0.1 282,263 + +0.8 282,307 + +0.8 282,307 + +0.5 282,307 + +1.5 282,307 + -1.4 282,307 + +1.0 282,307 + +0.2 282,308 - +1.7 282,308 - -1.0 282,308 - -1.6 282,308 - +0.3 282,308 - +0.5 282,310 + +0.0 282,310 + -0.3 282,310 + +0.2 282,310 + -0.6 282,310 + +0.3 282,310 + -0.4 282,310 + -0.9 282,310 + +0.4 282,310 + +0.2 282,311 - +0.7 282,311 - +0.3 282,311 - +0.0 282,311 - +0.4 282,311 - -0.3 282,311 - +0.9 282,311 - -3.0 282,311 - -0.9 282,311 - -0.6 282,311 - -0.3 282,317 + -0.6 282,317 + -1.0 282,317 + -0.8 282,318 - -0.7 282,522 + -0.1 282,522 + -0.2 282,567 + -0.4 282,568 - -1.0 282,629 + +0.6 282,629 + -0.6 282,629 + +1.2 282,629 + +0.3 282,629 + -1.0 282,632 + +0.0 282,632 + +0.7 282,632 + -2.3 282,632 + +1.0 282,632 + -1.3 282,632 + +0.8 282,632 + -0.4 282,632 + +0.9 282,644 + -0.2 282,644 + +0.0 282,644 + +0.4 282,644 + +1.0 282,644 + +0.2 282,644 + +1.7 282,644 + -1.5 282,644 + -0.4 282,644 + -0.5 282,696 + +0.0 282,708 + -1.3 283,131 + QEN71_RS01240 0.52 -0.3 283,131 + QEN71_RS01240 0.52 +0.0 283,131 + QEN71_RS01240 0.52 -1.5 283,131 + QEN71_RS01240 0.52 -0.8 283,173 + QEN71_RS01240 0.56 -1.0 283,182 + QEN71_RS01240 0.57 +0.0 283,182 + QEN71_RS01240 0.57 -0.6 283,577 + -1.1 283,577 + -1.7 283,577 + -0.6 283,577 + +0.9 283,577 + -0.6 283,577 + -0.3 283,577 + -0.7 283,578 - -1.0 283,578 - -0.5 283,578 - +0.0 283,676 + -2.6 283,676 + +0.6 283,676 + -0.9 283,676 + +0.3 283,676 + -0.9 284,216 - -1.0 284,437 - +0.0 284,474 + +0.7 284,476 + -0.2 284,476 + -1.3 284,476 + +0.9 284,476 + +0.4 284,476 + +0.1 284,476 + -0.3 284,476 + +0.2 284,476 + +0.2 284,476 + +0.1 284,476 + -0.4 284,476 + +1.4 284,476 + +0.3 284,476 + -0.3 284,476 + -0.5 284,476 + -1.8 284,476 + +1.1 284,476 + -0.0 284,476 + -0.4 284,476 + +0.3 284,476 + +1.0 284,477 - +0.6 284,477 - +0.1 284,477 - -3.4 284,477 - -0.2 284,477 - +2.6 284,477 - -0.3 284,477 - +0.3 284,477 - +0.7 284,477 - +1.4 284,477 - -0.8 284,477 - -0.6 284,477 - -0.2 284,477 - -0.5 284,477 - +0.9 284,477 - -0.8 284,477 - +0.3 284,477 - -1.3 284,477 - +0.0 284,477 - -0.9 284,477 - -0.4 284,477 - +0.0
Or see this region's nucleotide sequence