Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04092

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
4,589,801	+		MIT1002_04091	0.13	+3.1
4,589,850	-		MIT1002_04091	0.17	-2.5
4,589,852	+		MIT1002_04091	0.17	+0.2
4,589,862	+		MIT1002_04091	0.18	-1.2
4,589,963	+		MIT1002_04091	0.27	+0.2
4,590,017	-		MIT1002_04091	0.32	+1.7
4,590,055	+		MIT1002_04091	0.35	-1.5
4,590,062	-		MIT1002_04091	0.36	+1.9
4,590,062	-		MIT1002_04091	0.36	-0.5
4,590,108	-		MIT1002_04091	0.40	+0.5
4,590,109	-		MIT1002_04091	0.40	+1.9
4,590,115	-		MIT1002_04091	0.40	-0.9
4,590,117	+		MIT1002_04091	0.40	-1.1
4,590,124	+		MIT1002_04091	0.41	+0.3
4,590,125	-		MIT1002_04091	0.41	-1.4
4,590,174	-		MIT1002_04091	0.45	-0.7
4,590,174	-		MIT1002_04091	0.45	+1.2
4,590,193	-		MIT1002_04091	0.47	-0.7
4,590,278	+		MIT1002_04091	0.54	-0.3
4,590,295	+		MIT1002_04091	0.56	-0.1
4,590,344	+		MIT1002_04091	0.60	-3.1
4,590,344	+		MIT1002_04091	0.60	-1.1
4,590,352	-		MIT1002_04091	0.61	-1.7
4,590,354	+		MIT1002_04091	0.61	-0.3
4,590,361	+		MIT1002_04091	0.61	-1.7
4,590,375	-		MIT1002_04091	0.63	-2.0
4,590,375	-		MIT1002_04091	0.63	-0.7
4,590,412	-		MIT1002_04091	0.66	+1.8
4,590,464	+		MIT1002_04091	0.70	+0.3
4,590,542	+		MIT1002_04091	0.77	-0.7
4,590,545	+		MIT1002_04091	0.77	+2.2
4,590,547	+		MIT1002_04091	0.77	+0.1
4,590,550	-		MIT1002_04091	0.78	+1.5
4,590,550	-		MIT1002_04091	0.78	+0.9
4,590,560	-		MIT1002_04091	0.78	-0.5
4,590,560	-		MIT1002_04091	0.78	-0.3
4,590,564	+		MIT1002_04091	0.79	-2.7
4,590,607	+		MIT1002_04091	0.83	+0.7
4,590,975	+		MIT1002_04092	0.11	-1.2
4,591,021	+		MIT1002_04092	0.14	-1.0
4,591,264	+		MIT1002_04092	0.30	+0.3
4,591,272	-		MIT1002_04092	0.31	-1.9
4,591,272	-		MIT1002_04092	0.31	-0.3
4,591,272	-		MIT1002_04092	0.31	-0.9
4,591,300	+		MIT1002_04092	0.32	-2.3
4,591,325	+		MIT1002_04092	0.34	+0.3
4,591,350	+		MIT1002_04092	0.36	-0.2
4,591,358	-		MIT1002_04092	0.36	-1.3
4,591,448	+		MIT1002_04092	0.42	-1.5
4,591,490	-		MIT1002_04092	0.45	+0.9
4,591,534	-		MIT1002_04092	0.48	-0.7
4,591,656	-		MIT1002_04092	0.55	-1.4
4,591,744	+		MIT1002_04092	0.61	-1.5
4,591,868	+		MIT1002_04092	0.69	-1.1
4,591,883	-		MIT1002_04092	0.70	-0.4
4,591,955	-		MIT1002_04092	0.75	-0.4
4,591,980	+		MIT1002_04092	0.76	+0.3
4,592,027	-		MIT1002_04092	0.79	+0.7
4,592,027	-		MIT1002_04092	0.79	-1.0
4,592,064	+		MIT1002_04092	0.82	+1.5
4,592,072	-		MIT1002_04092	0.82	-0.6
4,592,148	+		MIT1002_04092	0.87	-0.4
4,592,171	+		MIT1002_04092	0.89	-1.1
4,592,181	-		MIT1002_04092	0.89	-2.0
4,592,226	+				-2.8
4,592,299	-				-1.5
4,592,347	-				-2.2
4,592,356	+				-1.6
4,592,654	+		MIT1002_04093	0.51	-0.1
4,592,862	-		MIT1002_04093	0.86	-2.0
4,592,901	+				-0.4
4,592,909	-				-0.5
4,592,909	-				+0.0
4,593,018	-				-0.2
4,593,029	-				-0.6
4,593,095	-		MIT1002_04094	0.32	-1.7
4,593,111	+		MIT1002_04094	0.37	-2.1
4,593,118	+		MIT1002_04094	0.40	+0.2
4,593,135	+		MIT1002_04094	0.45	-1.2
4,593,199	-		MIT1002_04094	0.67	+0.7
4,593,200	-		MIT1002_04094	0.68	-2.0