Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04071

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
4,568,861	-				+0.2
4,569,083	-		MIT1002_04070	0.40	+0.2
4,569,612	-		MIT1002_04071	0.12	-1.1
4,569,636	-		MIT1002_04071	0.15	-0.3
4,569,636	-		MIT1002_04071	0.15	+0.2
4,569,636	-		MIT1002_04071	0.15	-0.3
4,569,636	-		MIT1002_04071	0.15	+0.3
4,569,643	-		MIT1002_04071	0.16	-0.2
4,569,643	-		MIT1002_04071	0.16	+0.0
4,569,643	-		MIT1002_04071	0.16	+0.3
4,569,701	-		MIT1002_04071	0.24	-0.2
4,569,891	-		MIT1002_04071	0.51	-1.9
4,569,904	-		MIT1002_04071	0.53	-1.5
4,569,968	-		MIT1002_04071	0.62	-0.1
4,570,085	-		MIT1002_04071	0.78	-2.8
4,570,132	-		MIT1002_04071	0.85	+1.0
4,570,139	-		MIT1002_04071	0.86	-1.3
4,570,139	-		MIT1002_04071	0.86	-0.6
4,570,187	-				-1.3
4,570,482	+				+0.3
4,570,559	-				-0.6
4,570,580	+				+2.4
4,570,593	+				-0.3
4,570,601	-				+0.6
4,570,601	-				+0.2
4,570,603	-				+1.0
4,570,663	-		MIT1002_04072	0.14	+0.6
4,570,733	-		MIT1002_04072	0.22	+1.5
4,570,806	+		MIT1002_04072	0.30	-0.3
4,570,822	-		MIT1002_04072	0.32	+1.3
4,570,833	-		MIT1002_04072	0.34	+0.9
4,570,833	-		MIT1002_04072	0.34	+1.0
4,570,833	-		MIT1002_04072	0.34	-0.1
4,570,851	+		MIT1002_04072	0.36	+1.2
4,570,851	+		MIT1002_04072	0.36	-0.7
4,570,851	+		MIT1002_04072	0.36	+0.5
4,570,851	+		MIT1002_04072	0.36	-0.3
4,570,851	+		MIT1002_04072	0.36	-0.1
4,570,851	+		MIT1002_04072	0.36	-0.8
4,570,859	-		MIT1002_04072	0.37	+0.5
4,570,859	-		MIT1002_04072	0.37	+0.8
4,570,877	+		MIT1002_04072	0.39	+0.8
4,570,877	+		MIT1002_04072	0.39	+0.0
4,570,877	+		MIT1002_04072	0.39	+0.8
4,570,877	+		MIT1002_04072	0.39	+1.2
4,570,877	+		MIT1002_04072	0.39	+0.0
4,570,877	+		MIT1002_04072	0.39	-0.1
4,570,877	+		MIT1002_04072	0.39	+0.1
4,570,882	+		MIT1002_04072	0.39	+2.4
4,570,883	+		MIT1002_04072	0.39	+1.2
4,570,885	-		MIT1002_04072	0.40	-0.1
4,570,907	+		MIT1002_04072	0.42	+0.6
4,570,927	+		MIT1002_04072	0.44	-0.5
4,570,935	-		MIT1002_04072	0.45	-0.5
4,570,981	+		MIT1002_04072	0.51	+1.0
4,570,981	+		MIT1002_04072	0.51	+1.2
4,570,995	-		MIT1002_04072	0.52	+0.9
4,571,014	-		MIT1002_04072	0.55	+2.2
4,571,120	+		MIT1002_04072	0.67	+2.2
4,571,157	+		MIT1002_04072	0.71	-0.5
4,571,182	-		MIT1002_04072	0.74	+2.7
4,571,191	+		MIT1002_04072	0.75	-0.1
4,571,191	+		MIT1002_04072	0.75	+0.9
4,571,191	+		MIT1002_04072	0.75	+1.2
4,571,191	+		MIT1002_04072	0.75	+4.2
4,571,191	+		MIT1002_04072	0.75	-0.2
4,571,191	+		MIT1002_04072	0.75	+0.7
4,571,199	-		MIT1002_04072	0.76	-0.4