Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04055

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
4,554,607	-				+1.2
4,554,632	-				-0.8
4,554,703	+		MIT1002_04054	0.16	-2.5
4,554,703	+		MIT1002_04054	0.16	+0.7
4,554,711	-		MIT1002_04054	0.17	-0.2
4,554,719	+		MIT1002_04054	0.18	-0.4
4,554,719	+		MIT1002_04054	0.18	+0.5
4,554,727	-		MIT1002_04054	0.19	+0.9
4,554,806	-		MIT1002_04054	0.26	-0.7
4,554,906	+		MIT1002_04054	0.36	-1.7
4,554,956	-		MIT1002_04054	0.41	-0.3
4,554,963	+		MIT1002_04054	0.42	-0.5
4,554,970	+		MIT1002_04054	0.43	-1.1
4,554,978	+		MIT1002_04054	0.44	-0.9
4,554,978	-		MIT1002_04054	0.44	+0.2
4,554,984	+		MIT1002_04054	0.44	-1.7
4,554,984	+		MIT1002_04054	0.44	-0.5
4,554,984	+		MIT1002_04054	0.44	+0.6
4,554,986	-		MIT1002_04054	0.44	-0.1
4,554,986	-		MIT1002_04054	0.44	-0.3
4,554,992	-		MIT1002_04054	0.45	-1.1
4,554,992	-		MIT1002_04054	0.45	-0.1
4,555,172	+		MIT1002_04054	0.63	-0.7
4,555,172	+		MIT1002_04054	0.63	-1.6
4,555,244	-		MIT1002_04054	0.70	+0.5
4,555,259	-		MIT1002_04054	0.71	-0.2
4,555,410	-		MIT1002_04054	0.86	-0.9
4,555,410	-		MIT1002_04054	0.86	-2.5
4,555,410	-		MIT1002_04054	0.86	+2.7
4,555,448	-				+0.5
4,555,450	+				-0.7
4,555,767	-		MIT1002_04055	0.47	+0.3
4,555,767	-		MIT1002_04055	0.47	+0.7
4,555,829	+		MIT1002_04055	0.62	+0.1
4,555,829	+		MIT1002_04055	0.62	+0.9
4,555,829	+		MIT1002_04055	0.62	-0.4
4,555,837	-		MIT1002_04055	0.63	-1.4
4,555,887	+		MIT1002_04055	0.75	+3.1
4,555,895	-		MIT1002_04055	0.77	-2.1
4,555,975	+				+1.5
4,555,975	+				-0.3
4,555,981	+				+1.0
4,555,983	-				-3.5
4,555,983	-				+0.3
4,556,024	+				+0.5
4,556,083	+				+1.3
4,556,176	+				-0.2
4,556,176	+				+0.1
4,556,176	+				-0.0
4,556,176	+				-0.7
4,556,184	-				-1.6
4,556,184	-				-0.2
4,556,184	-				-1.1
4,556,235	-		MIT1002_04056	0.10	-1.9
4,556,250	+		MIT1002_04056	0.12	+0.0
4,556,291	+		MIT1002_04056	0.15	+0.7
4,556,299	-		MIT1002_04056	0.16	+0.7
4,556,351	+		MIT1002_04056	0.21	-1.0
4,556,396	-		MIT1002_04056	0.25	+1.3
4,556,424	+		MIT1002_04056	0.27	+0.3
4,556,451	-		MIT1002_04056	0.30	-0.6
4,556,459	+		MIT1002_04056	0.31	+0.5
4,556,467	-		MIT1002_04056	0.31	-0.1
4,556,499	-		MIT1002_04056	0.34	-2.7
4,556,514	-		MIT1002_04056	0.36	+0.6
4,556,609	+		MIT1002_04056	0.44	-1.4
4,556,610	+		MIT1002_04056	0.44	-1.8
4,556,617	-		MIT1002_04056	0.45	+2.2
4,556,629	+		MIT1002_04056	0.46	+1.5
4,556,629	+		MIT1002_04056	0.46	-1.5
4,556,637	-		MIT1002_04056	0.47	-0.6
4,556,709	-		MIT1002_04056	0.53	+0.9
4,556,806	-		MIT1002_04056	0.62	-1.9
4,556,808	+		MIT1002_04056	0.62	-2.2
4,556,844	-		MIT1002_04056	0.66	-0.8
4,556,844	-		MIT1002_04056	0.66	-3.2
4,556,902	+		MIT1002_04056	0.71	+0.2