Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03850

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
4,312,753	+		MIT1002_03849	0.61	+0.6
4,312,793	+		MIT1002_03849	0.63	+0.1
4,312,801	-		MIT1002_03849	0.64	-0.6
4,312,801	-		MIT1002_03849	0.64	+0.2
4,312,821	+		MIT1002_03849	0.65	-0.6
4,312,821	+		MIT1002_03849	0.65	+1.8
4,312,831	+		MIT1002_03849	0.66	+0.7
4,312,839	-		MIT1002_03849	0.66	-1.0
4,312,915	+		MIT1002_03849	0.71	+2.3
4,312,958	+		MIT1002_03849	0.74	+0.0
4,313,045	+		MIT1002_03849	0.79	-0.1
4,313,045	+		MIT1002_03849	0.79	+0.5
4,313,053	-		MIT1002_03849	0.80	+0.6
4,313,072	+		MIT1002_03849	0.81	+0.2
4,313,156	+		MIT1002_03849	0.86	+1.4
4,313,156	+		MIT1002_03849	0.86	+0.0
4,313,164	-		MIT1002_03849	0.87	+1.0
4,313,164	-		MIT1002_03849	0.87	-0.2
4,313,164	-		MIT1002_03849	0.87	+1.1
4,313,275	+				-0.2
4,313,356	+				+0.6
4,313,377	-				-1.4
4,313,416	+				+2.2
4,313,710	+				+0.4
4,313,710	+				-0.1
4,313,710	+				+0.9
4,313,710	+				-0.9
4,313,710	+				+3.1
4,313,710	+				-0.3
4,313,710	+				-1.6
4,313,710	+				+0.1
4,313,710	+				-0.5
4,313,716	-				-0.4
4,313,718	-				+0.4
4,313,718	-				-1.0
4,313,718	-				+0.2
4,313,718	-				+0.4
4,313,718	-				-0.4
4,313,720	+				+0.9
4,313,720	-				+0.3
4,313,788	-		MIT1002_03850	0.14	-0.2
4,313,816	-		MIT1002_03850	0.19	+0.9
4,313,821	-		MIT1002_03850	0.19	+0.7
4,313,833	+		MIT1002_03850	0.21	-2.0
4,313,841	-		MIT1002_03850	0.23	+0.9
4,313,841	-		MIT1002_03850	0.23	-0.8
4,313,941	+		MIT1002_03850	0.39	+1.0
4,313,981	-		MIT1002_03850	0.46	+2.5
4,314,026	+		MIT1002_03850	0.53	+2.6
4,314,107	+		MIT1002_03850	0.67	+0.9
4,314,115	-		MIT1002_03850	0.68	-0.2
4,314,130	+		MIT1002_03850	0.70	+0.1
4,314,198	+		MIT1002_03850	0.82	+1.1
4,314,241	+		MIT1002_03850	0.89	-0.5
4,314,262	+				-0.1
4,314,368	-				-2.0
4,314,540	-				-0.7
4,314,544	+				-1.6
4,314,544	+				-1.8
4,314,544	+				+0.0
4,314,552	-				-0.0
4,314,552	-				+1.4
4,314,552	-				+0.3
4,314,552	-				-0.5
4,314,552	-				+0.9
4,314,552	-				-0.4
4,314,552	-				+3.3
4,314,552	-				+2.0
4,314,611	-		MIT1002_03851	0.13	-0.4
4,314,639	-		MIT1002_03851	0.15	-1.2
4,314,639	-		MIT1002_03851	0.15	+1.2
4,314,641	+		MIT1002_03851	0.15	+0.7
4,314,641	+		MIT1002_03851	0.15	+0.2
4,314,649	+		MIT1002_03851	0.16	+1.2
4,314,649	+		MIT1002_03851	0.16	-1.0
4,314,649	-		MIT1002_03851	0.16	+0.0
4,314,657	-		MIT1002_03851	0.17	-0.2
4,314,675	+		MIT1002_03851	0.18	-0.5
4,314,678	-		MIT1002_03851	0.18	+0.9
4,314,704	+		MIT1002_03851	0.20	-0.6
4,314,712	-		MIT1002_03851	0.21	+0.7
4,314,745	-		MIT1002_03851	0.23	-0.9
4,314,795	-		MIT1002_03851	0.27	+0.8
4,314,827	-		MIT1002_03851	0.30	-0.1
4,314,842	-		MIT1002_03851	0.31	-0.9
4,314,854	+		MIT1002_03851	0.32	+0.1
4,314,931	-		MIT1002_03851	0.38	+0.3
4,314,945	-		MIT1002_03851	0.39	+0.7
4,314,952	-		MIT1002_03851	0.39	-0.4
4,315,006	+		MIT1002_03851	0.43	-1.0
4,315,087	+		MIT1002_03851	0.50	+0.5
4,315,105	-		MIT1002_03851	0.51	+0.3
4,315,144	-		MIT1002_03851	0.54	-0.5
4,315,198	+		MIT1002_03851	0.58	+0.1
4,315,204	-		MIT1002_03851	0.59	-1.5
4,315,234	+		MIT1002_03851	0.61	+1.2
4,315,297	+		MIT1002_03851	0.66	+0.5
4,315,297	+		MIT1002_03851	0.66	-0.4