Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03820

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
4,266,978	-				-0.0
4,267,066	+				-1.0
4,267,091	-				+0.8
4,267,095	-				-0.8
4,267,097	+				+0.8
4,267,105	-				-1.9
4,267,105	-				-2.3
4,267,105	-				+0.7
4,267,105	-				-0.1
4,267,117	-		MIT1002_03819	0.13	-2.1
4,267,183	+		MIT1002_03819	0.36	-0.1
4,267,197	-		MIT1002_03819	0.41	+0.5
4,267,199	+		MIT1002_03819	0.41	-1.1
4,267,252	+		MIT1002_03819	0.60	-0.5
4,267,252	+		MIT1002_03819	0.60	+0.1
4,267,260	-		MIT1002_03819	0.62	+2.0
4,267,333	+		MIT1002_03819	0.88	+1.0
4,267,341	-				-0.8
4,267,364	-				+0.7
4,267,386	+				+0.7
4,267,433	+				-1.7
4,267,438	+				-1.3
4,267,441	-				+0.5
4,267,538	-				-1.5
4,267,560	-				-0.4
4,267,582	+				-1.3
4,267,590	-				+1.6
4,267,590	-				+1.6
4,267,590	-				+0.7
4,267,638	+				+0.2
4,267,657	-				+0.3
4,267,678	-		MIT1002_03820	0.11	+0.7
4,267,848	-		MIT1002_03820	0.32	+0.8
4,267,874	+		MIT1002_03820	0.35	+0.4
4,267,909	+		MIT1002_03820	0.40	-0.0
4,267,917	-		MIT1002_03820	0.41	-0.4
4,267,917	-		MIT1002_03820	0.41	-3.1
4,267,918	-		MIT1002_03820	0.41	-1.3
4,267,918	-		MIT1002_03820	0.41	-2.6
4,268,037	-		MIT1002_03820	0.56	-0.3
4,268,070	-		MIT1002_03820	0.60	+0.9
4,268,102	+		MIT1002_03820	0.64	-0.9
4,268,141	-		MIT1002_03820	0.69	-0.6
4,268,193	+		MIT1002_03820	0.75	+0.6
4,268,201	-		MIT1002_03820	0.76	-1.4
4,268,247	+		MIT1002_03820	0.82	-0.6
4,268,276	+		MIT1002_03820	0.85	+1.0
4,268,283	+		MIT1002_03820	0.86	-0.3
4,268,376	+				+1.2
4,268,382	-				+0.9
4,268,382	-				+0.3
4,268,388	+				+0.3
4,268,453	+				+2.3
4,268,453	+				+1.9
4,268,461	-				+0.0
4,268,558	-		MIT1002_03821	0.12	+0.4
4,268,590	+		MIT1002_03821	0.15	+0.3
4,268,707	+		MIT1002_03821	0.24	-2.2
4,268,707	+		MIT1002_03821	0.24	-0.5
4,268,891	+		MIT1002_03821	0.38	-1.4
4,268,891	+		MIT1002_03821	0.38	-1.9
4,268,891	+		MIT1002_03821	0.38	-0.3
4,268,891	+		MIT1002_03821	0.38	-2.6
4,268,891	+		MIT1002_03821	0.38	+1.2
4,268,891	+		MIT1002_03821	0.38	-1.3
4,268,899	-		MIT1002_03821	0.38	-1.4
4,268,899	-		MIT1002_03821	0.38	+0.3
4,268,899	-		MIT1002_03821	0.38	+0.5
4,268,899	-		MIT1002_03821	0.38	+1.7
4,268,899	-		MIT1002_03821	0.38	-1.0
4,268,899	-		MIT1002_03821	0.38	+1.4
4,268,899	-		MIT1002_03821	0.38	-1.2
4,268,899	-		MIT1002_03821	0.38	+2.0
4,268,899	-		MIT1002_03821	0.38	+1.2
4,268,899	-		MIT1002_03821	0.38	-1.7
4,268,899	-		MIT1002_03821	0.38	-2.1
4,268,906	+		MIT1002_03821	0.39	-0.5
4,268,937	-		MIT1002_03821	0.41	-0.5
4,268,954	+		MIT1002_03821	0.42	-1.5
4,268,989	-		MIT1002_03821	0.45	-0.2
4,268,989	-		MIT1002_03821	0.45	-2.8
4,268,994	+		MIT1002_03821	0.45	-1.5
4,269,001	-		MIT1002_03821	0.46	-1.3
4,269,013	+		MIT1002_03821	0.47	+2.6
4,269,027	-		MIT1002_03821	0.48	-0.0
4,269,042	+		MIT1002_03821	0.49	+0.3
4,269,042	+		MIT1002_03821	0.49	+0.0
4,269,042	+		MIT1002_03821	0.49	-0.8
4,269,042	+		MIT1002_03821	0.49	-1.8
4,269,042	+		MIT1002_03821	0.49	+0.5
4,269,042	+		MIT1002_03821	0.49	-2.6
4,269,042	+		MIT1002_03821	0.49	-0.6
4,269,042	+		MIT1002_03821	0.49	-0.6
4,269,042	+		MIT1002_03821	0.49	+0.1
4,269,050	-		MIT1002_03821	0.50	+0.2
4,269,050	-		MIT1002_03821	0.50	-0.1
4,269,050	-		MIT1002_03821	0.50	-1.2
4,269,140	+		MIT1002_03821	0.56	-0.3
4,269,148	-		MIT1002_03821	0.57	+2.2
4,269,148	-		MIT1002_03821	0.57	-0.3
4,269,179	+		MIT1002_03821	0.59	+0.5
4,269,195	-		MIT1002_03821	0.60	+0.4
4,269,362	+		MIT1002_03821	0.73	+0.7
4,269,375	+		MIT1002_03821	0.74	+0.2