Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03698

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
4,129,013	+				+1.0
4,129,071	+				+0.5
4,129,116	+				-0.3
4,129,117	-				-0.4
4,129,126	-				-3.1
4,129,126	-				+0.3
4,129,131	-				-0.0
4,129,204	+		MIT1002_03697	0.11	-0.2
4,129,287	+		MIT1002_03697	0.22	-1.8
4,129,287	+		MIT1002_03697	0.22	+0.9
4,129,287	+		MIT1002_03697	0.22	+0.3
4,129,287	+		MIT1002_03697	0.22	-0.2
4,129,295	-		MIT1002_03697	0.23	+1.2
4,129,295	-		MIT1002_03697	0.23	-0.6
4,129,295	-		MIT1002_03697	0.23	+0.5
4,129,295	-		MIT1002_03697	0.23	-0.5
4,129,295	-		MIT1002_03697	0.23	-0.8
4,129,295	-		MIT1002_03697	0.23	+1.5
4,129,295	-		MIT1002_03697	0.23	-0.9
4,129,394	+		MIT1002_03697	0.36	-0.5
4,129,403	-		MIT1002_03697	0.38	+0.3
4,129,410	+		MIT1002_03697	0.39	-0.0
4,129,410	+		MIT1002_03697	0.39	-2.7
4,129,410	+		MIT1002_03697	0.39	-0.3
4,129,418	-		MIT1002_03697	0.40	+0.5
4,129,473	+		MIT1002_03697	0.47	+1.5
4,129,473	+		MIT1002_03697	0.47	-0.4
4,129,473	+		MIT1002_03697	0.47	+1.5
4,129,473	+		MIT1002_03697	0.47	-0.2
4,129,473	+		MIT1002_03697	0.47	+0.0
4,129,473	+		MIT1002_03697	0.47	-0.4
4,129,481	-		MIT1002_03697	0.48	+0.2
4,129,481	-		MIT1002_03697	0.48	-1.2
4,129,481	-		MIT1002_03697	0.48	-1.1
4,129,481	-		MIT1002_03697	0.48	-0.5
4,129,481	-		MIT1002_03697	0.48	-0.5
4,129,481	-		MIT1002_03697	0.48	+1.4
4,129,496	+		MIT1002_03697	0.50	-2.6
4,129,516	-		MIT1002_03697	0.53	-1.2
4,129,545	+		MIT1002_03697	0.57	-1.5
4,129,545	+		MIT1002_03697	0.57	+1.2
4,129,597	-		MIT1002_03697	0.64	-1.4
4,129,602	-		MIT1002_03697	0.65	-1.4
4,129,604	+		MIT1002_03697	0.65	+0.8
4,129,604	+		MIT1002_03697	0.65	-1.1
4,129,612	-		MIT1002_03697	0.66	-1.5
4,129,635	-		MIT1002_03697	0.69	+1.3
4,129,673	+		MIT1002_03697	0.75	-0.6
4,129,737	-		MIT1002_03697	0.83	-2.9
4,129,752	-		MIT1002_03697	0.85	+1.2
4,129,803	+				-0.6
4,129,839	+				-1.6
4,129,839	+				+0.4
4,129,847	-				-1.1
4,129,847	-				+0.6
4,129,852	+				+1.4
4,129,952	+				-0.2
4,129,960	-				+0.2
4,129,961	-				+1.4
4,130,078	+		MIT1002_03698	0.18	-3.7
4,130,139	-		MIT1002_03698	0.28	-2.0
4,130,166	-		MIT1002_03698	0.32	-0.5
4,130,218	+		MIT1002_03698	0.39	-0.9
4,130,226	-		MIT1002_03698	0.41	-1.6
4,130,263	+		MIT1002_03698	0.46	-1.1
4,130,263	+		MIT1002_03698	0.46	-1.8
4,130,320	+		MIT1002_03698	0.55	-2.4
4,130,381	-		MIT1002_03698	0.64	+1.2
4,130,425	-		MIT1002_03698	0.70	-2.7
4,130,511	-		MIT1002_03698	0.83	-2.4
4,130,511	-		MIT1002_03698	0.83	-2.2
4,130,600	-				-2.0
4,130,644	-				-0.2
4,130,653	-				-0.9
4,130,656	+				+4.5
4,130,679	+				-0.2
4,130,733	+		MIT1002_03699	0.13	+0.5
4,130,772	-		MIT1002_03699	0.18	+0.6
4,130,775	-		MIT1002_03699	0.19	-1.7
4,130,775	-		MIT1002_03699	0.19	+0.1
4,130,889	+		MIT1002_03699	0.33	-1.7
4,130,897	-		MIT1002_03699	0.34	-1.1
4,130,940	+		MIT1002_03699	0.39	+1.9
4,130,948	-		MIT1002_03699	0.40	-1.7
4,130,948	-		MIT1002_03699	0.40	+0.1
4,130,948	-		MIT1002_03699	0.40	-0.3
4,131,020	-		MIT1002_03699	0.49	-0.2
4,131,020	-		MIT1002_03699	0.49	-0.5
4,131,020	-		MIT1002_03699	0.49	+2.5
4,131,098	+		MIT1002_03699	0.58	-1.7
4,131,099	-		MIT1002_03699	0.58	-0.1
4,131,122	-		MIT1002_03699	0.61	+0.8
4,131,164	+		MIT1002_03699	0.66	-1.6
4,131,164	+		MIT1002_03699	0.66	-0.2
4,131,164	+		MIT1002_03699	0.66	-3.0
4,131,172	-		MIT1002_03699	0.67	-0.1
4,131,207	+		MIT1002_03699	0.72	-1.1
4,131,207	+		MIT1002_03699	0.72	-0.3
4,131,215	-		MIT1002_03699	0.73	-0.2
4,131,256	+		MIT1002_03699	0.78	+0.1
4,131,321	-		MIT1002_03699	0.86	+0.9
4,131,357	+				-0.8
4,131,410	+				-1.2
4,131,451	+				-0.1
4,131,456	+				-0.3
4,131,464	-				+0.5