Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03449

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
3,855,927	-		MIT1002_03448	0.42	+0.1
3,855,946	+		MIT1002_03448	0.43	-0.8
3,855,986	+		MIT1002_03448	0.46	-0.3
3,855,994	-		MIT1002_03448	0.46	+0.1
3,856,081	-		MIT1002_03448	0.51	+0.6
3,856,090	-		MIT1002_03448	0.52	-1.4
3,856,182	-		MIT1002_03448	0.57	+0.2
3,856,182	-		MIT1002_03448	0.57	+1.6
3,856,200	+		MIT1002_03448	0.58	-0.4
3,856,203	-		MIT1002_03448	0.58	-3.0
3,856,264	+		MIT1002_03448	0.62	-0.2
3,856,280	-		MIT1002_03448	0.63	+1.4
3,856,337	+		MIT1002_03448	0.66	-0.9
3,856,337	+		MIT1002_03448	0.66	+0.7
3,856,453	+		MIT1002_03448	0.73	-0.5
3,856,495	+		MIT1002_03448	0.76	+1.4
3,856,530	-		MIT1002_03448	0.78	-0.3
3,856,579	+		MIT1002_03448	0.81	-1.7
3,856,582	-		MIT1002_03448	0.81	-0.6
3,856,582	-		MIT1002_03448	0.81	+0.8
3,856,584	+		MIT1002_03448	0.81	+1.0
3,856,584	+		MIT1002_03448	0.81	+0.2
3,856,587	-		MIT1002_03448	0.81	-1.9
3,856,592	+		MIT1002_03448	0.81	+0.9
3,856,592	-		MIT1002_03448	0.81	+0.8
3,856,604	+		MIT1002_03448	0.82	-0.2
3,856,659	-		MIT1002_03448	0.85	+0.7
3,856,707	-		MIT1002_03448	0.88	-0.2
3,856,714	-		MIT1002_03448	0.89	-0.5
3,856,733	+		MIT1002_03448	0.90	-2.6
3,856,871	+				+0.0
3,857,068	+		MIT1002_03449	0.11	-1.2
3,857,076	-		MIT1002_03449	0.12	-2.3
3,857,076	-		MIT1002_03449	0.12	+1.1
3,857,092	+		MIT1002_03449	0.13	+1.3
3,857,136	+		MIT1002_03449	0.16	-0.7
3,857,154	+		MIT1002_03449	0.17	-0.4
3,857,162	-		MIT1002_03449	0.18	-2.3
3,857,243	-		MIT1002_03449	0.24	-0.6
3,857,345	+		MIT1002_03449	0.31	-1.7
3,857,352	+		MIT1002_03449	0.31	+0.3
3,857,352	-		MIT1002_03449	0.31	+0.3
3,857,461	-		MIT1002_03449	0.39	-1.3
3,857,610	+		MIT1002_03449	0.49	-0.9
3,857,618	-		MIT1002_03449	0.50	-0.5
3,857,662	+		MIT1002_03449	0.53	+0.6
3,857,662	+		MIT1002_03449	0.53	-1.0
3,857,662	+		MIT1002_03449	0.53	+1.2
3,857,662	+		MIT1002_03449	0.53	+0.4
3,857,670	-		MIT1002_03449	0.54	-0.9
3,857,670	-		MIT1002_03449	0.54	-0.9
3,857,670	-		MIT1002_03449	0.54	+0.6
3,857,670	-		MIT1002_03449	0.54	+1.1
3,857,670	-		MIT1002_03449	0.54	-0.8
3,857,686	-		MIT1002_03449	0.55	-0.2
3,857,694	-		MIT1002_03449	0.55	+1.4
3,857,699	-		MIT1002_03449	0.56	+0.6
3,857,754	+		MIT1002_03449	0.59	-0.1
3,857,866	-		MIT1002_03449	0.67	-0.2
3,857,870	+		MIT1002_03449	0.68	-0.7
3,857,878	-		MIT1002_03449	0.68	-1.5
3,857,878	-		MIT1002_03449	0.68	-0.7
3,857,913	-		MIT1002_03449	0.71	+0.0
3,857,937	-		MIT1002_03449	0.72	+0.8
3,858,001	-		MIT1002_03449	0.77	-0.1
3,858,007	+		MIT1002_03449	0.77	-0.5
3,858,015	-		MIT1002_03449	0.78	+0.3
3,858,015	-		MIT1002_03449	0.78	+1.2
3,858,020	+		MIT1002_03449	0.78	-1.2
3,858,020	+		MIT1002_03449	0.78	+0.2
3,858,218	+				-0.9
3,858,335	-				+1.6
3,858,369	+				+1.0
3,858,459	+		MIT1002_03450	0.19	-0.7
3,858,479	-		MIT1002_03450	0.22	-0.5
3,858,662	-		MIT1002_03450	0.51	-0.6
3,858,777	+		MIT1002_03450	0.69	-1.6
3,858,919	+				+0.7
3,858,950	+				+0.5
3,858,958	-				-0.4
3,858,958	-				+1.1
3,858,958	-				+1.3
3,858,958	-				+0.2
3,859,040	+				+0.4
3,859,052	+				+0.6
3,859,061	+				+1.4
3,859,128	+				+3.2
3,859,198	-		MIT1002_03451	0.19	-0.6
3,859,209	+		MIT1002_03451	0.21	+0.8