Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03400

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
3,803,243	+		MIT1002_03399	0.22	+1.7
3,803,265	-		MIT1002_03399	0.24	+0.4
3,803,348	+		MIT1002_03399	0.32	+0.2
3,803,348	+		MIT1002_03399	0.32	+0.5
3,803,348	+		MIT1002_03399	0.32	-1.8
3,803,348	+		MIT1002_03399	0.32	+1.4
3,803,565	+		MIT1002_03399	0.52	-0.5
3,803,565	+		MIT1002_03399	0.52	+0.8
3,803,573	-		MIT1002_03399	0.53	+0.6
3,803,598	+		MIT1002_03399	0.55	+0.2
3,803,598	+		MIT1002_03399	0.55	+0.1
3,803,598	+		MIT1002_03399	0.55	-0.9
3,803,598	+		MIT1002_03399	0.55	-0.3
3,803,598	+		MIT1002_03399	0.55	-2.0
3,803,598	+		MIT1002_03399	0.55	+0.1
3,803,598	+		MIT1002_03399	0.55	+0.2
3,803,598	+		MIT1002_03399	0.55	+1.2
3,803,606	-		MIT1002_03399	0.56	-0.4
3,803,606	-		MIT1002_03399	0.56	+1.5
3,803,606	-		MIT1002_03399	0.56	-0.4
3,803,606	-		MIT1002_03399	0.56	-0.4
3,803,606	-		MIT1002_03399	0.56	-0.6
3,803,606	-		MIT1002_03399	0.56	+1.3
3,803,606	-		MIT1002_03399	0.56	+2.0
3,803,606	-		MIT1002_03399	0.56	+1.3
3,803,606	-		MIT1002_03399	0.56	+0.1
3,803,606	-		MIT1002_03399	0.56	-0.7
3,803,633	+		MIT1002_03399	0.58	-0.3
3,803,650	+		MIT1002_03399	0.60	+0.9
3,803,687	+		MIT1002_03399	0.63	+0.5
3,803,697	+		MIT1002_03399	0.64	-0.2
3,803,803	+		MIT1002_03399	0.74	+1.4
3,803,905	-		MIT1002_03399	0.83	+0.4
3,803,988	+				-1.4
3,804,027	+				-0.4
3,804,035	-				-0.7
3,804,041	-				-1.6
3,804,155	-				-1.1
3,804,194	-				+0.8
3,804,223	+				+0.5
3,804,223	+				-0.3
3,804,231	-				-0.9
3,804,280	+		MIT1002_03400	0.11	-1.1
3,804,308	+		MIT1002_03400	0.16	+1.4
3,804,337	+		MIT1002_03400	0.22	+1.1
3,804,345	-		MIT1002_03400	0.24	-1.2
3,804,346	+		MIT1002_03400	0.24	+0.2
3,804,354	-		MIT1002_03400	0.25	+0.6
3,804,518	+		MIT1002_03400	0.58	+0.2
3,804,563	+		MIT1002_03400	0.67	-0.8
3,804,624	+		MIT1002_03400	0.79	-2.1
3,804,632	-		MIT1002_03400	0.81	-0.5
3,804,632	-		MIT1002_03400	0.81	+0.7
3,804,632	-		MIT1002_03400	0.81	+0.4
3,804,637	-		MIT1002_03400	0.82	+1.6
3,804,639	-		MIT1002_03400	0.82	+1.1
3,804,659	-		MIT1002_03400	0.86	+0.3
3,804,702	-				+1.3
3,804,734	-				+0.4
3,804,816	+				-0.0
3,804,825	-				+0.1
3,804,830	-				+0.2
3,804,898	+				-1.0
3,804,898	+				-0.1
3,804,919	+				+0.6
3,804,920	-				+1.5
3,804,920	-				-1.5
3,804,947	-				+1.4
3,804,947	-				+0.8
3,804,968	+				-2.6
3,805,094	+		MIT1002_03401	0.12	-0.2
3,805,122	-		MIT1002_03401	0.15	+1.4
3,805,122	-		MIT1002_03401	0.15	+0.6
3,805,122	-		MIT1002_03401	0.15	-0.5
3,805,136	-		MIT1002_03401	0.16	-1.1
3,805,238	-		MIT1002_03401	0.26	-0.6
3,805,248	-		MIT1002_03401	0.27	+0.0
3,805,248	-		MIT1002_03401	0.27	-1.7
3,805,274	-		MIT1002_03401	0.30	-0.5
3,805,410	+		MIT1002_03401	0.43	+0.8
3,805,445	-		MIT1002_03401	0.46	+1.0
3,805,460	+		MIT1002_03401	0.48	-0.1
3,805,463	+		MIT1002_03401	0.48	+0.7
3,805,468	-		MIT1002_03401	0.49	+0.2
3,805,519	+		MIT1002_03401	0.54	-0.6
3,805,527	+		MIT1002_03401	0.54	+3.0
3,805,527	+		MIT1002_03401	0.54	+3.1
3,805,527	+		MIT1002_03401	0.54	-1.9
3,805,527	+		MIT1002_03401	0.54	-1.2
3,805,556	+		MIT1002_03401	0.57	+0.7
3,805,614	-		MIT1002_03401	0.63	+0.2
3,805,621	+		MIT1002_03401	0.64	+0.7
3,805,643	+		MIT1002_03401	0.66	-0.4
3,805,646	+		MIT1002_03401	0.66	-1.0
3,805,703	+		MIT1002_03401	0.72	+1.2