Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03300

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
3,681,109	+		MIT1002_03299	0.73	-0.7
3,681,149	+		MIT1002_03299	0.75	+1.0
3,681,153	+		MIT1002_03299	0.75	-0.1
3,681,161	-		MIT1002_03299	0.75	+1.9
3,681,161	-		MIT1002_03299	0.75	+2.5
3,681,190	+		MIT1002_03299	0.77	+0.3
3,681,246	-		MIT1002_03299	0.79	-1.6
3,681,246	-		MIT1002_03299	0.79	-0.3
3,681,282	+		MIT1002_03299	0.81	-1.1
3,681,290	-		MIT1002_03299	0.81	+0.0
3,681,365	-		MIT1002_03299	0.85	-1.1
3,681,403	-		MIT1002_03299	0.87	+0.5
3,681,411	-		MIT1002_03299	0.87	+1.5
3,681,411	-		MIT1002_03299	0.87	+1.0
3,681,411	-		MIT1002_03299	0.87	-1.1
3,681,465	+		MIT1002_03299	0.89	+1.2
3,681,484	-				-0.3
3,681,493	-				-0.2
3,681,493	-				+1.3
3,681,499	+				+0.9
3,681,499	+				+0.8
3,681,549	+				-0.4
3,681,555	-				+0.7
3,681,582	+				-1.8
3,681,592	+				+2.3
3,681,678	-				+0.0
3,681,693	-				+1.3
3,681,909	+				-1.3
3,681,909	+				+1.0
3,681,909	+				-1.3
3,681,909	+				+1.2
3,681,909	+				+0.1
3,681,917	-				-1.0
3,682,021	+				-2.8
3,682,021	+				-4.8
3,682,214	+		MIT1002_03300	0.26	-2.8
3,682,227	+		MIT1002_03300	0.27	+1.0
3,682,236	+		MIT1002_03300	0.28	-4.6
3,682,236	+		MIT1002_03300	0.28	+0.8
3,682,262	+		MIT1002_03300	0.32	-4.5
3,682,265	-		MIT1002_03300	0.32	-3.1
3,682,275	+		MIT1002_03300	0.33	-3.4
3,682,345	+		MIT1002_03300	0.42	-3.7
3,682,350	+		MIT1002_03300	0.43	-1.6
3,682,355	-		MIT1002_03300	0.44	-1.6
3,682,358	-		MIT1002_03300	0.44	-2.4
3,682,395	+		MIT1002_03300	0.49	-2.7
3,682,404	-		MIT1002_03300	0.50	-3.6
3,682,407	+		MIT1002_03300	0.50	-0.7
3,682,420	+		MIT1002_03300	0.52	+0.3
3,682,445	+		MIT1002_03300	0.55	-2.9
3,682,453	-		MIT1002_03300	0.56	-4.1
3,682,534	-		MIT1002_03300	0.66	-4.4
3,682,616	-		MIT1002_03300	0.77	-2.2
3,682,693	+		MIT1002_03300	0.87	-0.1
3,682,738	+				-3.5
3,682,746	-				-0.2
3,682,798	+				-3.1
3,682,798	+				-0.7
3,682,806	-				-1.3
3,682,806	-				-0.3
3,682,806	-				-0.7
3,682,807	-				-1.1
3,682,918	+				+2.2
3,683,024	-		MIT1002_03301	0.10	+0.6
3,683,073	-		MIT1002_03301	0.14	-0.3
3,683,086	+		MIT1002_03301	0.15	-0.6
3,683,187	-		MIT1002_03301	0.22	-1.4
3,683,221	+		MIT1002_03301	0.24	-2.8
3,683,221	+		MIT1002_03301	0.24	+0.6
3,683,229	-		MIT1002_03301	0.25	+0.6
3,683,273	+		MIT1002_03301	0.28	-0.3
3,683,359	+		MIT1002_03301	0.34	-1.0
3,683,359	+		MIT1002_03301	0.34	+0.1
3,683,359	+		MIT1002_03301	0.34	-0.6
3,683,367	-		MIT1002_03301	0.35	-0.6
3,683,461	+		MIT1002_03301	0.42	+1.3
3,683,461	+		MIT1002_03301	0.42	+0.0
3,683,469	-		MIT1002_03301	0.42	-0.4
3,683,540	+		MIT1002_03301	0.47	-0.1
3,683,577	-		MIT1002_03301	0.50	-2.0
3,683,579	-		MIT1002_03301	0.50	-0.2
3,683,583	+		MIT1002_03301	0.50	-0.8
3,683,591	-		MIT1002_03301	0.51	+0.3
3,683,591	-		MIT1002_03301	0.51	-0.7
3,683,647	+		MIT1002_03301	0.55	+2.6
3,683,710	+		MIT1002_03301	0.59	-0.4
3,683,730	-		MIT1002_03301	0.61	-0.9
3,683,751	+		MIT1002_03301	0.62	+2.8
3,683,756	+		MIT1002_03301	0.63	+0.2
3,683,761	-		MIT1002_03301	0.63	-1.7
3,683,768	+		MIT1002_03301	0.64	+1.0
3,683,770	+		MIT1002_03301	0.64	+0.3