Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03163

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
3,525,841	-		MIT1002_03161	0.66	-1.2
3,525,851	+		MIT1002_03161	0.68	-1.1
3,525,874	+		MIT1002_03161	0.72	-1.7
3,525,882	-		MIT1002_03161	0.73	-0.3
3,525,887	-		MIT1002_03161	0.74	+0.8
3,525,887	-		MIT1002_03161	0.74	-0.0
3,525,903	-		MIT1002_03161	0.77	-2.3
3,526,041	+				-0.1
3,526,049	-				+0.8
3,526,107	+				-0.1
3,526,142	+				-0.0
3,526,142	+				-0.2
3,526,150	-				-1.0
3,526,170	+				+0.3
3,526,205	+				+0.9
3,526,213	-				+0.4
3,526,213	-				-0.5
3,526,213	-				-1.3
3,526,215	+				+0.3
3,526,215	+				+1.4
3,526,215	-				-1.2
3,526,223	-				-2.5
3,526,223	-				-1.9
3,526,244	-				+0.5
3,526,346	-		MIT1002_03162	0.35	-0.5
3,526,408	-		MIT1002_03162	0.53	-1.0
3,526,516	-		MIT1002_03162	0.84	-0.9
3,526,564	+				-0.5
3,526,565	+				-1.0
3,526,565	+				+0.0
3,526,567	+				-1.2
3,526,578	+				+0.3
3,526,684	+				-0.2
3,526,808	+				-2.0
3,526,855	+				+0.7
3,526,863	-				-0.9
3,526,883	+				+2.5
3,527,050	+		MIT1002_03163	0.28	+0.3
3,527,057	-		MIT1002_03163	0.29	+0.7
3,527,067	-		MIT1002_03163	0.30	+1.7
3,527,111	-		MIT1002_03163	0.35	-1.0
3,527,111	-		MIT1002_03163	0.35	+1.8
3,527,149	+		MIT1002_03163	0.40	-0.4
3,527,149	-		MIT1002_03163	0.40	+1.0
3,527,149	-		MIT1002_03163	0.40	-0.8
3,527,183	+		MIT1002_03163	0.44	+1.1
3,527,191	-		MIT1002_03163	0.45	+0.3
3,527,193	-		MIT1002_03163	0.45	-0.2
3,527,193	-		MIT1002_03163	0.45	+0.2
3,527,230	+		MIT1002_03163	0.49	-0.2
3,527,230	+		MIT1002_03163	0.49	+0.3
3,527,230	+		MIT1002_03163	0.49	+0.8
3,527,231	+		MIT1002_03163	0.50	+0.7
3,527,238	-		MIT1002_03163	0.50	+0.4
3,527,240	-		MIT1002_03163	0.51	+1.8
3,527,284	+		MIT1002_03163	0.56	-0.1
3,527,292	+		MIT1002_03163	0.57	+1.4
3,527,360	+		MIT1002_03163	0.65	-1.8
3,527,519	+		MIT1002_03163	0.84	-0.4
3,527,572	+				-0.2
3,527,634	+				-0.6
3,527,705	-				+1.4
3,527,979	+				-0.9
3,528,027	+				+2.1
3,528,106	-		MIT1002_03165	0.18	+0.2
3,528,155	-		MIT1002_03165	0.24	-0.6
3,528,364	-		MIT1002_03165	0.50	+1.2
3,528,364	-		MIT1002_03165	0.50	-0.8
3,528,379	-		MIT1002_03165	0.52	+1.1
3,528,402	-		MIT1002_03165	0.55	+0.4
3,528,456	-		MIT1002_03165	0.61	+1.2
3,528,628	+		MIT1002_03165	0.82	-3.9
3,528,636	-		MIT1002_03165	0.83	+0.2