Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03050

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
3,401,940	+		MIT1002_03049	0.65	-0.6
3,402,011	+		MIT1002_03049	0.68	-0.6
3,402,019	-		MIT1002_03049	0.68	-0.3
3,402,019	-		MIT1002_03049	0.68	-1.9
3,402,021	+		MIT1002_03049	0.68	+0.9
3,402,021	+		MIT1002_03049	0.68	-0.2
3,402,021	+		MIT1002_03049	0.68	+0.6
3,402,021	+		MIT1002_03049	0.68	-1.9
3,402,021	+		MIT1002_03049	0.68	-1.7
3,402,029	-		MIT1002_03049	0.69	+0.7
3,402,029	-		MIT1002_03049	0.69	-0.1
3,402,029	-		MIT1002_03049	0.69	+0.6
3,402,089	+		MIT1002_03049	0.72	-0.6
3,402,160	+		MIT1002_03049	0.75	-1.6
3,402,160	-		MIT1002_03049	0.75	-0.1
3,402,244	+		MIT1002_03049	0.79	+0.9
3,402,245	-		MIT1002_03049	0.79	-2.8
3,402,284	+		MIT1002_03049	0.81	-0.8
3,402,286	+		MIT1002_03049	0.81	-0.3
3,402,305	+		MIT1002_03049	0.82	-0.8
3,402,305	+		MIT1002_03049	0.82	-0.0
3,402,429	+		MIT1002_03049	0.88	-0.3
3,402,434	+		MIT1002_03049	0.88	-1.0
3,402,434	+		MIT1002_03049	0.88	-1.1
3,402,434	+		MIT1002_03049	0.88	+0.8
3,402,434	+		MIT1002_03049	0.88	+1.8
3,402,434	+		MIT1002_03049	0.88	+1.2
3,402,434	+		MIT1002_03049	0.88	+0.8
3,402,434	+		MIT1002_03049	0.88	-1.7
3,402,442	-		MIT1002_03049	0.89	+0.4
3,402,442	-		MIT1002_03049	0.89	+0.4
3,402,442	-		MIT1002_03049	0.89	-0.2
3,402,470	+				+0.3
3,402,479	+				+0.7
3,402,479	+				-0.2
3,402,487	-				-0.0
3,402,487	-				+0.1
3,402,487	-				-0.1
3,402,487	-				+0.2
3,402,501	+				+0.8
3,402,511	+				-0.3
3,402,528	+				-0.9
3,402,528	+				-0.4
3,402,536	-				-0.6
3,402,543	-				-2.1
3,402,599	+				-0.8
3,402,615	-				+1.1
3,402,634	-				-2.0
3,402,645	+				-3.0
3,402,645	+				+0.4
3,402,645	+				-2.2
3,402,645	+				+0.7
3,402,653	-				-0.4
3,402,659	-				-1.0
3,402,718	-				+0.4
3,402,804	-				-0.5
3,402,826	-				+0.7
3,402,835	+				+0.2
3,402,841	-				-0.1
3,402,846	-				-1.4
3,402,996	-		MIT1002_03050	0.16	-1.3
3,403,004	+		MIT1002_03050	0.16	-2.5
3,403,094	+		MIT1002_03050	0.24	-2.4
3,403,275	+		MIT1002_03050	0.40	-2.2
3,403,280	+		MIT1002_03050	0.41	-1.8
3,403,363	-		MIT1002_03050	0.48	-2.7
3,403,390	+		MIT1002_03050	0.51	-0.8
3,403,395	+		MIT1002_03050	0.51	-1.0
3,403,481	-		MIT1002_03050	0.59	+0.1
3,403,571	+		MIT1002_03050	0.67	-2.3
3,403,579	-		MIT1002_03050	0.67	-0.9
3,403,689	+		MIT1002_03050	0.77	-2.1
3,403,697	-		MIT1002_03050	0.78	-2.8
3,403,697	-		MIT1002_03050	0.78	-2.0
3,403,726	+		MIT1002_03050	0.80	-1.0
3,403,745	-		MIT1002_03050	0.82	-1.5
3,403,798	-		MIT1002_03050	0.87	-0.9
3,403,825	-		MIT1002_03050	0.89	-0.1
3,403,887	+				-2.3
3,403,895	-				-2.6
3,403,903	-				-2.0
3,403,979	+				+0.4
3,403,987	-				-1.6
3,403,991	+				-0.9
3,403,999	-				-1.7
3,404,006	-				-1.3
3,404,021	-				-1.9
3,404,024	+				-2.0
3,404,050	-				-0.8
3,404,076	+				-0.6
3,404,076	+				-0.2
3,404,084	-				-1.2
3,404,096	-				+0.6
3,404,111	-				-1.5
3,404,130	+				-0.1
3,404,130	+				-2.1
3,404,151	-				-1.2
3,404,185	+				-1.9
3,404,287	+				+0.1
3,404,287	+				+1.1
3,404,295	-				-0.7
3,404,295	-				-1.3
3,404,351	+				-0.6
3,404,351	-				+1.0
3,404,359	-				-0.3
3,404,376	+				-1.4
3,404,376	+				-0.8
3,404,433	-				-1.5
3,404,436	+				-0.4
3,404,442	-				+2.4
3,404,519	-				+0.6
3,404,553	+		MIT1002_03051	0.11	-2.0
3,404,554	-		MIT1002_03051	0.11	+0.1
3,404,554	-		MIT1002_03051	0.11	+0.4
3,404,650	+		MIT1002_03051	0.16	+0.5
3,404,710	-		MIT1002_03051	0.20	+0.6
3,404,710	-		MIT1002_03051	0.20	+1.5
3,404,712	-		MIT1002_03051	0.20	+0.0
3,404,738	-		MIT1002_03051	0.21	-2.1
3,404,776	+		MIT1002_03051	0.23	+0.5
3,404,807	-		MIT1002_03051	0.25	-2.5
3,404,815	-		MIT1002_03051	0.26	-0.5
3,404,815	-		MIT1002_03051	0.26	-1.7
3,404,820	-		MIT1002_03051	0.26	+2.6
3,404,822	+		MIT1002_03051	0.26	+0.3
3,404,822	+		MIT1002_03051	0.26	+0.8
3,404,835	-		MIT1002_03051	0.27	+0.2
3,404,851	+		MIT1002_03051	0.28	-1.5
3,404,858	-		MIT1002_03051	0.28	+1.0
3,404,881	+		MIT1002_03051	0.29	+2.3
3,404,889	-		MIT1002_03051	0.30	-1.4