Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03034

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
3,380,680	-				+0.2
3,380,792	-		MIT1002_03033	0.12	+1.0
3,380,884	-		MIT1002_03033	0.22	-1.2
3,381,119	-		MIT1002_03033	0.47	-1.0
3,381,179	-		MIT1002_03033	0.53	+0.0
3,381,220	-		MIT1002_03033	0.57	-1.4
3,381,240	-		MIT1002_03033	0.60	+1.6
3,381,257	-		MIT1002_03033	0.61	-1.2
3,381,682	-		MIT1002_03034	0.14	-4.1
3,381,691	-		MIT1002_03034	0.16	-2.4
3,381,938	-		MIT1002_03034	0.70	+2.4
3,381,938	-		MIT1002_03034	0.70	-1.0
3,381,953	-		MIT1002_03034	0.73	-3.8
3,381,964	-		MIT1002_03034	0.76	-2.5
3,381,974	-		MIT1002_03034	0.78	-3.5
3,381,974	-		MIT1002_03034	0.78	-1.3
3,382,224	+				+0.8
3,382,237	+				-1.6
3,382,237	+				-2.4
3,382,290	+				+0.4
3,382,292	-				-0.9
3,382,421	-				-2.6
3,382,462	-				-0.4
3,382,465	+				-0.4
3,382,503	+				+0.3
3,382,506	-				-1.0
3,382,606	+				-0.9
3,382,861	-		MIT1002_03035	0.36	+0.1
3,382,861	-		MIT1002_03035	0.36	-0.5
3,382,861	-		MIT1002_03035	0.36	+0.4
3,382,921	+		MIT1002_03035	0.43	-1.7
3,382,921	+		MIT1002_03035	0.43	-0.2
3,382,929	-		MIT1002_03035	0.44	-0.1
3,382,929	-		MIT1002_03035	0.44	-1.1
3,382,931	+		MIT1002_03035	0.44	-0.5
3,382,948	+		MIT1002_03035	0.46	+1.8
3,382,956	-		MIT1002_03035	0.47	-0.2
3,382,956	-		MIT1002_03035	0.47	+1.4
3,383,034	-		MIT1002_03035	0.57	-1.3