Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02892

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
3,215,007	-		MIT1002_02891	0.38	-0.6
3,215,007	-		MIT1002_02891	0.38	-0.4
3,215,119	+		MIT1002_02891	0.45	-1.0
3,215,148	+		MIT1002_02891	0.47	-0.8
3,215,178	-		MIT1002_02891	0.49	+0.4
3,215,178	-		MIT1002_02891	0.49	-0.9
3,215,178	-		MIT1002_02891	0.49	+0.1
3,215,178	-		MIT1002_02891	0.49	+1.3
3,215,275	+		MIT1002_02891	0.55	-0.3
3,215,370	+		MIT1002_02891	0.62	-1.0
3,215,378	-		MIT1002_02891	0.62	+0.9
3,215,490	-		MIT1002_02891	0.70	-0.4
3,215,592	+		MIT1002_02891	0.77	+1.0
3,215,648	-		MIT1002_02891	0.80	-2.3
3,215,648	-		MIT1002_02891	0.80	+1.9
3,215,673	+		MIT1002_02891	0.82	-2.8
3,215,719	-		MIT1002_02891	0.85	+0.9
3,215,725	-		MIT1002_02891	0.85	+0.3
3,215,768	-		MIT1002_02891	0.88	+0.1
3,215,801	+				-0.1
3,215,801	+				+0.5
3,215,801	+				-1.3
3,215,809	-				+1.0
3,215,945	-				+0.2
3,215,946	-				-0.1
3,215,957	+				-0.6
3,215,964	-				+1.4
3,215,965	-				-1.6
3,215,965	-				+0.9
3,215,966	-				+0.8
3,215,994	+				-3.6
3,216,001	-				-3.0
3,216,112	+		MIT1002_02892	0.15	-0.4
3,216,213	+		MIT1002_02892	0.25	-3.2
3,216,232	+		MIT1002_02892	0.27	-1.0
3,216,245	-		MIT1002_02892	0.28	-2.1
3,216,267	+		MIT1002_02892	0.30	+0.6
3,216,286	+		MIT1002_02892	0.32	-2.4
3,216,358	-		MIT1002_02892	0.39	-2.7
3,216,433	-		MIT1002_02892	0.46	+0.0
3,216,603	-		MIT1002_02892	0.63	-1.7
3,216,829	-		MIT1002_02892	0.85	-0.8
3,216,935	+				-1.3
3,216,945	-				-2.1
3,216,951	-				-3.0
3,217,059	-				+1.1
3,217,059	-				-0.5
3,217,062	+				-1.2
3,217,070	-				-1.3
3,217,202	+				+0.4
3,217,218	+				-0.8
3,217,218	+				+0.6
3,217,218	+				-0.3
3,217,226	-				+0.3
3,217,226	-				+1.8
3,217,226	-				+0.0
3,217,226	-				-1.2
3,217,226	-				-1.4
3,217,270	+		MIT1002_02893	0.16	-0.6
3,217,270	+		MIT1002_02893	0.16	+1.3
3,217,294	+		MIT1002_02893	0.20	-2.3
3,217,408	-		MIT1002_02893	0.38	+0.0
3,217,489	+		MIT1002_02893	0.51	-1.8
3,217,504	+		MIT1002_02893	0.53	-1.8
3,217,548	-		MIT1002_02893	0.60	-1.3
3,217,548	-		MIT1002_02893	0.60	-0.5
3,217,551	+		MIT1002_02893	0.60	+0.1
3,217,551	+		MIT1002_02893	0.60	+0.9
3,217,551	+		MIT1002_02893	0.60	-1.6
3,217,551	+		MIT1002_02893	0.60	+0.4
3,217,551	+		MIT1002_02893	0.60	+1.8
3,217,559	-		MIT1002_02893	0.62	-0.7
3,217,559	-		MIT1002_02893	0.62	+0.0
3,217,559	-		MIT1002_02893	0.62	-1.3
3,217,559	-		MIT1002_02893	0.62	-0.2
3,217,559	-		MIT1002_02893	0.62	-0.6
3,217,705	-		MIT1002_02893	0.85	+0.2
3,217,751	+				+1.1
3,217,798	+				+0.9
3,217,843	+				-0.5
3,217,907	+				+0.8
3,217,915	-				+0.7
3,217,915	-				+3.0
3,217,915	-				-1.6
3,217,915	-				-0.8
3,217,938	-				+1.3
3,217,962	-				+1.1
3,217,970	+				+1.7