Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02811

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
3,115,159	-		MIT1002_02810	0.13	-1.3
3,115,304	+		MIT1002_02810	0.29	-2.5
3,115,351	-		MIT1002_02810	0.34	+0.8
3,115,363	+		MIT1002_02810	0.35	-1.7
3,115,463	-		MIT1002_02810	0.46	-2.3
3,115,486	+		MIT1002_02810	0.48	-1.2
3,115,486	+		MIT1002_02810	0.48	-1.2
3,115,520	+		MIT1002_02810	0.52	+0.5
3,115,532	+		MIT1002_02810	0.53	-7.4
3,115,554	+		MIT1002_02810	0.55	-2.3
3,115,590	+		MIT1002_02810	0.59	-1.6
3,115,615	+		MIT1002_02810	0.62	-1.6
3,115,634	-		MIT1002_02810	0.64	-4.7
3,115,650	-		MIT1002_02810	0.65	-0.3
3,115,665	+		MIT1002_02810	0.67	-3.7
3,115,713	+		MIT1002_02810	0.72	+1.4
3,115,832	+		MIT1002_02810	0.85	-1.2
3,115,863	+		MIT1002_02810	0.88	-2.4
3,115,949	+				-1.7
3,115,971	+				-3.3
3,116,014	+				-1.3
3,116,022	-				+0.4
3,116,022	-				-1.0
3,116,049	+				-3.0
3,116,101	+				-2.6
3,116,112	+				-3.1
3,116,191	+		MIT1002_02811	0.11	-0.3
3,116,199	-		MIT1002_02811	0.12	-1.0
3,116,199	-		MIT1002_02811	0.12	-2.3
3,116,214	+		MIT1002_02811	0.12	+0.4
3,116,268	-		MIT1002_02811	0.15	-3.2
3,116,306	-		MIT1002_02811	0.17	-4.6
3,116,306	-		MIT1002_02811	0.17	-2.5
3,116,309	+		MIT1002_02811	0.18	-3.3
3,116,457	+		MIT1002_02811	0.26	-2.8
3,116,459	+		MIT1002_02811	0.26	-2.1
3,116,467	-		MIT1002_02811	0.26	-7.0
3,116,477	+		MIT1002_02811	0.27	-1.0
3,116,486	-		MIT1002_02811	0.27	-6.2
3,116,505	+		MIT1002_02811	0.28	-1.0
3,116,547	+		MIT1002_02811	0.31	-1.8
3,116,553	-		MIT1002_02811	0.31	-0.6
3,116,553	-		MIT1002_02811	0.31	-1.2
3,116,575	+		MIT1002_02811	0.32	-3.8
3,116,621	+		MIT1002_02811	0.35	-2.3
3,116,736	-		MIT1002_02811	0.41	-4.6
3,116,812	+		MIT1002_02811	0.45	-0.9
3,116,814	+		MIT1002_02811	0.45	+1.0
3,116,837	-		MIT1002_02811	0.46	+1.0
3,117,037	+		MIT1002_02811	0.57	-0.9
3,117,047	+		MIT1002_02811	0.58	-0.1
3,117,055	-		MIT1002_02811	0.58	-1.3
3,117,055	-		MIT1002_02811	0.58	-1.9
3,117,204	+		MIT1002_02811	0.66	-1.2
3,117,204	+		MIT1002_02811	0.66	-2.1
3,117,204	+		MIT1002_02811	0.66	+0.4
3,117,204	+		MIT1002_02811	0.66	-3.4
3,117,222	+		MIT1002_02811	0.67	+1.0
3,117,222	+		MIT1002_02811	0.67	-2.2
3,117,230	-		MIT1002_02811	0.68	-0.9
3,117,230	-		MIT1002_02811	0.68	-2.3
3,117,266	+		MIT1002_02811	0.69	-3.3
3,117,266	+		MIT1002_02811	0.69	-5.8
3,117,274	-		MIT1002_02811	0.70	-0.6
3,117,274	-		MIT1002_02811	0.70	-1.9
3,117,274	-		MIT1002_02811	0.70	-1.5
3,117,321	+		MIT1002_02811	0.72	+0.8
3,117,418	-		MIT1002_02811	0.78	-2.9
3,117,435	+		MIT1002_02811	0.79	-1.3
3,117,441	-		MIT1002_02811	0.79	-0.5
3,117,458	-		MIT1002_02811	0.80	-5.6
3,117,458	-		MIT1002_02811	0.80	-2.1
3,117,458	-		MIT1002_02811	0.80	-1.9
3,117,458	-		MIT1002_02811	0.80	-1.8
3,117,458	-		MIT1002_02811	0.80	-2.2
3,117,458	-		MIT1002_02811	0.80	+1.4
3,117,458	-		MIT1002_02811	0.80	+0.5
3,117,486	-		MIT1002_02811	0.81	-1.8
3,117,699	-				-1.5
3,117,801	-				-1.9
3,117,801	-				+1.4
3,117,825	+				-1.0
3,117,828	-				-0.9
3,117,830	+				-3.3
3,117,849	+				-1.9
3,117,851	+				-2.1
3,117,913	+				-3.0
3,117,913	+				-0.7
3,117,913	+				-1.6
3,117,913	+				-0.8
3,118,086	+		MIT1002_02812	0.60	-3.1
3,118,086	+		MIT1002_02812	0.60	+0.2
3,118,086	+		MIT1002_02812	0.60	-0.2
3,118,094	-		MIT1002_02812	0.62	+0.4
3,118,094	-		MIT1002_02812	0.62	+0.2
3,118,179	+		MIT1002_02812	0.88	-1.8
3,118,179	+		MIT1002_02812	0.88	-0.2
3,118,189	+				-1.5
3,118,333	-				+0.5
3,118,334	+				-1.0
3,118,340	-				+0.2
3,118,379	-		MIT1002_02813	0.12	+1.4
3,118,379	-		MIT1002_02813	0.12	+0.0
3,118,379	-		MIT1002_02813	0.12	+1.7
3,118,403	-		MIT1002_02813	0.14	-0.3
3,118,505	+		MIT1002_02813	0.23	-0.4
3,118,518	-		MIT1002_02813	0.25	+1.8
3,118,532	-		MIT1002_02813	0.26	-1.4
3,118,540	-		MIT1002_02813	0.27	+0.4
3,118,561	+		MIT1002_02813	0.28	-1.5
3,118,561	+		MIT1002_02813	0.28	-1.6
3,118,569	+		MIT1002_02813	0.29	-0.2
3,118,569	-		MIT1002_02813	0.29	+0.8
3,118,569	-		MIT1002_02813	0.29	-1.9
3,118,569	-		MIT1002_02813	0.29	-0.5
3,118,569	-		MIT1002_02813	0.29	-0.4
3,118,569	-		MIT1002_02813	0.29	-1.4
3,118,569	-		MIT1002_02813	0.29	+1.4
3,118,571	+		MIT1002_02813	0.29	-3.1
3,118,589	+		MIT1002_02813	0.31	-0.3
3,118,602	-		MIT1002_02813	0.32	+0.3
3,118,618	-		MIT1002_02813	0.34	+0.0
3,118,778	+		MIT1002_02813	0.48	-0.8
3,118,786	-		MIT1002_02813	0.49	-0.5
3,118,793	-		MIT1002_02813	0.49	-1.2
3,118,793	-		MIT1002_02813	0.49	-2.4