Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02684

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,984,861	-				+0.5
2,985,003	+				-0.6
2,985,003	+				+1.6
2,985,011	-				-0.9
2,985,011	-				-1.8
2,985,011	-				-0.0
2,985,015	+				+1.1
2,985,254	+		MIT1002_02683	0.40	-2.7
2,985,261	+		MIT1002_02683	0.41	+1.3
2,985,261	+		MIT1002_02683	0.41	-1.6
2,985,261	+		MIT1002_02683	0.41	-0.9
2,985,264	-		MIT1002_02683	0.42	-0.3
2,985,269	-		MIT1002_02683	0.43	-0.6
2,985,320	+		MIT1002_02683	0.52	+0.8
2,985,320	-		MIT1002_02683	0.52	-0.2
2,985,323	-		MIT1002_02683	0.52	+0.9
2,985,354	-		MIT1002_02683	0.57	-0.7
2,985,359	-		MIT1002_02683	0.58	+0.2
2,985,392	-		MIT1002_02683	0.64	+0.3
2,985,463	+		MIT1002_02683	0.76	-1.7
2,985,564	+				+2.3
2,985,594	+				-0.4
2,985,602	-				+0.8
2,985,635	+				+2.1
2,985,635	+				+2.9
2,985,635	+				+0.0
2,985,852	+				+2.8
2,985,916	+		MIT1002_02684	0.13	-3.1
2,985,916	+		MIT1002_02684	0.13	-2.2
2,985,921	+		MIT1002_02684	0.14	-1.9
2,985,921	+		MIT1002_02684	0.14	-1.7
2,985,924	-		MIT1002_02684	0.15	-2.4
2,985,924	-		MIT1002_02684	0.15	-2.2
2,985,924	-		MIT1002_02684	0.15	-1.8
2,986,077	+		MIT1002_02684	0.49	-0.8
2,986,085	-		MIT1002_02684	0.50	+1.3
2,986,096	+		MIT1002_02684	0.53	-0.1
2,986,102	+		MIT1002_02684	0.54	-0.4
2,986,104	-		MIT1002_02684	0.55	-3.4
2,986,132	+		MIT1002_02684	0.61	+0.5
2,986,132	+		MIT1002_02684	0.61	-2.0
2,986,140	-		MIT1002_02684	0.62	-2.4
2,986,140	-		MIT1002_02684	0.62	-4.1
2,986,140	-		MIT1002_02684	0.62	-2.5
2,986,140	-		MIT1002_02684	0.62	-2.3
2,986,168	-		MIT1002_02684	0.69	-0.4
2,986,169	+		MIT1002_02684	0.69	+2.3
2,986,192	-		MIT1002_02684	0.74	-1.2
2,986,253	+		MIT1002_02684	0.87	-2.6
2,986,348	-				+0.3
2,986,377	+				-1.3
2,986,380	+		MIT1002_02685	0.10	+0.2
2,986,425	+		MIT1002_02685	0.16	+0.3
2,986,449	+		MIT1002_02685	0.20	-1.2
2,986,482	-		MIT1002_02685	0.24	-1.1
2,986,525	+		MIT1002_02685	0.30	+0.6
2,986,525	+		MIT1002_02685	0.30	-1.9
2,986,528	-		MIT1002_02685	0.31	-1.3
2,986,533	-		MIT1002_02685	0.31	-1.7
2,986,619	-		MIT1002_02685	0.43	+1.2
2,986,631	-		MIT1002_02685	0.45	+0.5
2,986,631	-		MIT1002_02685	0.45	-0.2
2,986,644	+		MIT1002_02685	0.47	-2.3
2,986,734	-		MIT1002_02685	0.59	+1.2
2,986,741	+		MIT1002_02685	0.60	+0.2
2,986,785	-		MIT1002_02685	0.66	-0.4
2,986,785	-		MIT1002_02685	0.66	-1.2
2,986,801	-		MIT1002_02685	0.69	-0.8
2,986,814	-		MIT1002_02685	0.70	+1.8
2,986,833	-		MIT1002_02685	0.73	-1.2
2,986,894	+		MIT1002_02685	0.82	-1.9
2,986,902	+		MIT1002_02685	0.83	-1.6
2,986,902	+		MIT1002_02685	0.83	-0.8
2,986,910	-		MIT1002_02685	0.84	+1.2
2,986,981	-				+0.3
2,986,993	-				+0.9
2,987,029	-				-0.3
2,987,065	-				-2.4
2,987,076	+				-2.4
2,987,084	-				-0.2
2,987,093	+				-1.3
2,987,102	-				-1.2
2,987,113	+				-0.6
2,987,138	+				-0.1
2,987,138	+				+2.0
2,987,138	+				-2.0
2,987,205	+		MIT1002_02686	0.13	-1.2
2,987,223	+		MIT1002_02686	0.15	-1.3
2,987,223	+		MIT1002_02686	0.15	-0.5
2,987,273	+		MIT1002_02686	0.19	-0.4