Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02660

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,955,729	+				+0.4
2,955,742	-				-0.0
2,955,816	+		MIT1002_02659	0.29	+1.1
2,955,880	-		MIT1002_02659	0.45	+0.2
2,956,046	+		MIT1002_02659	0.89	+1.6
2,956,049	+		MIT1002_02659	0.90	+0.4
2,956,107	-				+0.9
2,956,125	+				+1.0
2,956,132	+				-0.3
2,956,133	-				+0.5
2,956,156	-				-1.2
2,956,279	+				-2.0
2,956,287	-				-0.5
2,956,292	-				+1.2
2,956,397	+				+1.1
2,956,402	-				+2.6
2,956,402	-				+1.5
2,956,405	-				+1.2
2,956,453	+				+0.8
2,956,453	+				+2.1
2,956,461	-				-0.5
2,956,468	-				+0.5
2,956,482	+				-0.4
2,956,482	+				+0.3
2,956,482	+				+1.2
2,956,482	+				-0.1
2,956,485	-				-1.0
2,956,485	-				+1.0
2,956,490	-				-2.3
2,956,602	+				+0.9
2,956,641	-				+1.2
2,956,641	-				+2.5
2,956,641	-				-1.0
2,956,641	-				+0.8
2,956,648	+				+1.5
2,956,651	-				+1.9
2,956,656	-				+0.0
2,956,756	+		MIT1002_02660	0.10	-0.3
2,956,756	+		MIT1002_02660	0.10	+1.6
2,956,881	-		MIT1002_02660	0.35	+1.0
2,956,963	-		MIT1002_02660	0.50	-0.4
2,957,017	-		MIT1002_02660	0.61	-1.5
2,957,017	-		MIT1002_02660	0.61	+0.0
2,957,110	-		MIT1002_02660	0.79	+0.5
2,957,119	+		MIT1002_02660	0.81	-0.8
2,957,205	+				+0.2
2,957,205	+				+0.4