Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02562

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,859,411	+				+0.8
2,859,472	-				+0.6
2,859,570	+				+1.2
2,859,570	+				-0.5
2,859,583	+		MIT1002_02561	0.12	-1.7
2,859,597	-		MIT1002_02561	0.14	-0.3
2,859,774	+		MIT1002_02561	0.38	-0.4
2,859,836	+		MIT1002_02561	0.47	-0.7
2,859,841	+		MIT1002_02561	0.47	+1.8
2,859,844	-		MIT1002_02561	0.48	-0.7
2,859,871	+		MIT1002_02561	0.52	-0.6
2,859,871	+		MIT1002_02561	0.52	-1.6
2,859,890	+		MIT1002_02561	0.54	-1.3
2,859,892	+		MIT1002_02561	0.54	-0.1
2,859,892	+		MIT1002_02561	0.54	-0.5
2,859,898	-		MIT1002_02561	0.55	-1.1
2,859,900	-		MIT1002_02561	0.56	+1.1
2,859,900	-		MIT1002_02561	0.56	-0.6
2,859,962	+		MIT1002_02561	0.64	+0.8
2,859,970	-		MIT1002_02561	0.65	-0.9
2,859,970	-		MIT1002_02561	0.65	-0.9
2,859,981	+		MIT1002_02561	0.67	+0.1
2,860,215	+				-3.0
2,860,241	+				-0.9
2,860,244	-				+0.5
2,860,407	+				+0.7
2,860,407	+				+1.1
2,860,415	-				-1.8
2,860,427	-				+0.9
2,860,450	-		MIT1002_02562	0.11	+1.2
2,860,655	+		MIT1002_02562	0.39	-0.8
2,860,711	+		MIT1002_02562	0.47	+0.8
2,860,719	-		MIT1002_02562	0.48	-1.7
2,860,783	-		MIT1002_02562	0.57	-0.0
2,860,783	-		MIT1002_02562	0.57	+0.2
2,860,868	+		MIT1002_02562	0.69	+0.4
2,860,923	-		MIT1002_02562	0.77	-1.1
2,860,985	+		MIT1002_02562	0.86	+0.4
2,860,985	+		MIT1002_02562	0.86	-0.6
2,860,991	-		MIT1002_02562	0.87	-0.7
2,860,993	-		MIT1002_02562	0.87	-0.0
2,861,044	+				-1.3
2,861,052	-				-1.3
2,861,061	+				-2.3
2,861,087	-				-0.4
2,861,095	-				+0.6
2,861,113	+				+1.0
2,861,113	+				-1.0
2,861,113	+				-0.3
2,861,121	-				+0.5
2,861,155	-				-0.5
2,861,157	+				+0.4
2,861,165	-				-1.4
2,861,165	-				-0.2
2,861,185	+				+0.7
2,861,192	-				-0.5
2,861,200	-		MIT1002_02563	0.11	+0.2
2,861,239	+		MIT1002_02563	0.20	-1.6
2,861,274	+		MIT1002_02563	0.28	-1.3
2,861,282	-		MIT1002_02563	0.29	+0.5
2,861,287	-		MIT1002_02563	0.30	-0.2
2,861,297	-		MIT1002_02563	0.33	+0.9
2,861,374	+		MIT1002_02563	0.50	+0.5
2,861,376	+		MIT1002_02563	0.50	-0.3
2,861,385	+		MIT1002_02563	0.52	+1.5
2,861,415	+		MIT1002_02563	0.59	-0.9
2,861,423	-		MIT1002_02563	0.61	-0.6
2,861,517	+		MIT1002_02563	0.82	-0.5
2,861,520	-		MIT1002_02563	0.82	+0.1
2,861,532	-		MIT1002_02563	0.85	-0.7
2,861,630	+				-0.9
2,861,636	-				-0.5
2,861,672	+				-0.1
2,861,672	+				+1.2
2,861,712	-				-1.1
2,861,714	+				+3.2
2,861,714	+				+1.1
2,861,769	-		MIT1002_02564	0.14	-1.1
2,861,837	-		MIT1002_02564	0.19	+0.9
2,861,885	+		MIT1002_02564	0.23	-2.5
2,861,929	+		MIT1002_02564	0.27	-0.1
2,862,023	+		MIT1002_02564	0.35	-0.7
2,862,026	-		MIT1002_02564	0.35	+0.8
2,862,031	-		MIT1002_02564	0.35	+1.2
2,862,032	-		MIT1002_02564	0.35	-0.1