Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02349

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,616,049	+		MIT1002_02348	0.12	-2.8
2,616,087	-		MIT1002_02348	0.16	-1.2
2,616,087	-		MIT1002_02348	0.16	+0.6
2,616,136	+		MIT1002_02348	0.21	-4.4
2,616,184	-		MIT1002_02348	0.26	-2.8
2,616,195	+		MIT1002_02348	0.27	-7.2
2,616,203	-		MIT1002_02348	0.27	-1.4
2,616,203	-		MIT1002_02348	0.27	-5.0
2,616,269	-		MIT1002_02348	0.34	-3.7
2,616,559	-		MIT1002_02348	0.64	-1.4
2,616,603	+		MIT1002_02348	0.68	-3.6
2,616,608	+		MIT1002_02348	0.68	-4.2
2,616,608	+		MIT1002_02348	0.68	-4.1
2,616,608	+		MIT1002_02348	0.68	-2.7
2,616,608	+		MIT1002_02348	0.68	-2.0
2,616,680	+		MIT1002_02348	0.76	-1.0
2,616,690	+		MIT1002_02348	0.77	-1.6
2,616,698	-		MIT1002_02348	0.78	+0.3
2,616,738	+		MIT1002_02348	0.82	-1.4
2,616,747	-		MIT1002_02348	0.83	-3.1
2,616,748	+		MIT1002_02348	0.83	-3.1
2,616,748	+		MIT1002_02348	0.83	-3.7
2,616,748	+		MIT1002_02348	0.83	-2.8
2,616,748	+		MIT1002_02348	0.83	-1.1
2,616,756	-		MIT1002_02348	0.83	-3.8
2,616,756	-		MIT1002_02348	0.83	-1.2
2,616,802	+		MIT1002_02348	0.88	-1.2
2,616,802	+		MIT1002_02348	0.88	-2.0
2,616,817	-		MIT1002_02348	0.90	-3.2
2,616,841	-				-0.6
2,616,843	+				-3.3
2,616,849	+				-4.7
2,616,851	-				-3.0
2,616,908	+				-0.9
2,616,916	-				-1.2
2,616,943	+				-1.0
2,616,977	+				+1.3
2,616,982	+				-0.9
2,616,990	-				-0.9
2,616,991	+				-1.1
2,616,991	+				-0.4
2,617,001	+				-0.8
2,617,023	+				-1.2
2,617,058	+				-4.6
2,617,071	-				-2.1
2,617,096	+				+0.8
2,617,096	+				-3.2
2,617,096	+				-2.2
2,617,104	-				-2.5
2,617,106	+				-1.6
2,617,106	+				-2.9
2,617,106	+				-2.9
2,617,106	+				+0.6
2,617,106	+				-2.9
2,617,106	+				-2.4
2,617,106	+				-2.0
2,617,106	+				-3.1
2,617,106	+				-2.9
2,617,106	+				-4.7
2,617,106	+				-0.7
2,617,106	+				-1.2
2,617,108	+				-1.8
2,617,114	-				-1.9
2,617,114	-				-5.7
2,617,114	-				-2.1
2,617,114	-				-1.9
2,617,114	-				-2.6
2,617,122	-				-1.1
2,617,141	+				-1.2
2,617,206	+		MIT1002_02349	0.16	-0.9
2,617,214	-		MIT1002_02349	0.16	-2.7
2,617,230	+		MIT1002_02349	0.18	-5.2
2,617,270	+		MIT1002_02349	0.22	-1.9
2,617,271	+		MIT1002_02349	0.22	-3.8
2,617,279	-		MIT1002_02349	0.23	-2.1
2,617,279	-		MIT1002_02349	0.23	-2.6
2,617,303	-		MIT1002_02349	0.25	-2.6
2,617,349	-		MIT1002_02349	0.29	-3.7
2,617,349	-		MIT1002_02349	0.29	-1.1
2,617,364	+		MIT1002_02349	0.31	-0.0
2,617,475	+		MIT1002_02349	0.41	-2.7
2,617,561	+		MIT1002_02349	0.50	-3.3
2,617,652	+		MIT1002_02349	0.58	-1.1
2,617,668	+		MIT1002_02349	0.60	-4.6
2,617,749	+		MIT1002_02349	0.68	-5.1
2,617,805	+		MIT1002_02349	0.73	-1.2
2,617,813	+		MIT1002_02349	0.74	+0.1
2,617,813	+		MIT1002_02349	0.74	-2.4
2,617,813	-		MIT1002_02349	0.74	-2.6
2,617,815	+		MIT1002_02349	0.74	-2.3
2,617,815	+		MIT1002_02349	0.74	-3.5
2,617,823	-		MIT1002_02349	0.75	-1.8
2,617,828	-		MIT1002_02349	0.75	+0.3
2,617,878	-		MIT1002_02349	0.80	-2.0
2,617,932	+		MIT1002_02349	0.85	+1.1
2,617,932	+		MIT1002_02349	0.85	-2.6
2,617,932	+		MIT1002_02349	0.85	-1.4
2,617,932	+		MIT1002_02349	0.85	-5.0
2,617,940	-		MIT1002_02349	0.86	+0.6
2,617,940	-		MIT1002_02349	0.86	+0.3
2,617,940	-		MIT1002_02349	0.86	-5.7
2,617,940	-		MIT1002_02349	0.86	-0.4
2,617,958	+		MIT1002_02349	0.88	-2.0
2,617,958	+		MIT1002_02349	0.88	-3.7
2,617,966	-		MIT1002_02349	0.89	-0.4
2,617,969	+		MIT1002_02349	0.89	-0.9
2,617,986	-				-4.0
2,617,991	+				-5.6
2,618,012	+				-0.2
2,618,017	+				-1.8
2,618,017	+				+0.6
2,618,017	+				-2.4
2,618,017	+				-3.4
2,618,017	+				-1.5
2,618,018	+				-2.6
2,618,020	-				-3.2
2,618,025	-				-0.9
2,618,025	-				-3.2
2,618,025	-				-1.0
2,618,025	-				-1.2
2,618,025	-				-6.3
2,618,025	-				-2.8
2,618,025	-				-3.6
2,618,025	-				-4.1
2,618,079	+				-0.4
2,618,087	-				-1.0
2,618,087	-				-1.4
2,618,087	-				+0.9
2,618,087	-				-1.9
2,618,087	-				+0.9
2,618,097	-				-0.6
2,618,127	+				-1.1
2,618,127	+				+1.6
2,618,134	+				-1.5
2,618,134	+				-0.8
2,618,135	-				-0.7
2,618,135	-				+0.3
2,618,139	+				-1.2
2,618,142	-				-1.3
2,618,168	+				-0.5
2,618,168	+				+0.6
2,618,168	+				+2.2
2,618,168	+				-0.9
2,618,176	-				-0.1
2,618,176	-				-1.0
2,618,176	-				+0.1
2,618,176	-				-0.1
2,618,176	-				-1.1
2,618,184	+				-1.4
2,618,184	+				+0.0
2,618,184	+				-2.4
2,618,184	+				+0.3
2,618,184	+				+1.6
2,618,184	+				-0.6
2,618,184	+				+0.7
2,618,184	+				-0.8
2,618,184	+				-0.4
2,618,184	+				-1.0
2,618,184	+				+2.1
2,618,184	+				+2.7
2,618,184	+				+1.0
2,618,184	+				+1.8
2,618,184	+				-1.0
2,618,184	+				-0.0
2,618,184	+				-1.5
2,618,184	+				-0.2
2,618,184	+				-0.7
2,618,184	+				-0.4
2,618,184	+				-1.2
2,618,184	+				-1.0
2,618,184	+				-1.7
2,618,184	+				+2.1
2,618,184	+				-0.3
2,618,184	+				+0.5
2,618,184	+				+0.9
2,618,184	+				+1.5
2,618,184	+				-0.0
2,618,184	+				-1.1
2,618,184	+				-1.5
2,618,184	+				-0.2
2,618,184	+				+0.2
2,618,184	+				+1.3
2,618,184	+				-0.6
2,618,184	+				-2.4
2,618,184	+				+2.3
2,618,184	+				-1.6
2,618,184	+				+0.2
2,618,184	+				-0.7
2,618,184	+				+1.1
2,618,184	+				-2.1
2,618,184	+				-0.8
2,618,184	+				-0.2
2,618,184	+				+1.8
2,618,189	+				-2.6
2,618,189	+				+0.1
2,618,189	+				+0.2
2,618,189	+				+0.1
2,618,192	-				-0.5
2,618,192	-				-0.9
2,618,192	-				-0.2
2,618,192	-				-0.6
2,618,192	-				-0.4
2,618,192	-				-0.3
2,618,192	-				+0.1
2,618,192	-				-0.8
2,618,192	-				+0.9
2,618,192	-				+0.9
2,618,192	-				+0.4
2,618,192	-				+1.2
2,618,192	-				+1.0
2,618,192	-				+1.0
2,618,192	-				+2.4
2,618,192	-				+0.1
2,618,192	-				-1.8
2,618,192	-				-0.6
2,618,192	-				-0.4
2,618,192	-				+1.7
2,618,192	-				+2.1
2,618,192	-				-1.2
2,618,192	-				+0.8
2,618,192	-				+1.4
2,618,192	-				+0.3
2,618,192	-				-0.8
2,618,192	-				-1.9
2,618,192	-				-1.3
2,618,192	-				+0.3
2,618,192	-				+1.5
2,618,192	-				+0.6
2,618,192	-				+0.6
2,618,192	-				-1.4
2,618,192	-				+0.1
2,618,192	-				-0.6
2,618,192	-				-0.1
2,618,192	-				-0.2
2,618,192	-				-0.4
2,618,192	-				-1.5
2,618,192	-				+0.5
2,618,192	-				+1.3
2,618,192	-				-0.3
2,618,192	-				-0.1
2,618,192	-				-0.4
2,618,192	-				-1.1
2,618,192	-				+0.1
2,618,192	-				-0.3
2,618,192	-				+0.3
2,618,192	-				+0.8
2,618,197	-				-0.8
2,618,197	-				+1.3
2,618,208	+				-0.1
2,618,208	+				-1.3
2,618,208	+				-0.5
2,618,208	+				-0.6
2,618,208	+				+0.3
2,618,208	+				+0.1
2,618,208	+				+1.1
2,618,208	+				+2.1
2,618,208	+				-0.6
2,618,208	+				-0.3
2,618,208	+				-0.0
2,618,209	+				-0.1
2,618,209	+				+1.3
2,618,209	+				-0.1
2,618,209	+				+0.6
2,618,212	-				+0.4
2,618,214	+				-1.6
2,618,215	+				+2.0
2,618,215	+				+0.2
2,618,216	+				-0.0
2,618,216	-				+0.5
2,618,216	-				+0.3
2,618,216	-				-0.6
2,618,216	-				-0.9
2,618,216	-				-0.2
2,618,216	-				-0.5
2,618,216	-				-0.4
2,618,216	-				-1.8
2,618,216	-				-0.2
2,618,217	-				-0.1
2,618,217	-				+1.0
2,618,217	-				-1.0
2,618,223	+				+0.1
2,618,223	-				+0.3
2,618,224	-				-0.8
2,618,224	-				+3.0
2,618,249	+				+0.9
2,618,293	+				-0.0
2,618,326	-				-0.2
2,618,352	+				-1.2
2,618,360	-				-0.9
2,618,413	+				-0.8
2,618,413	+				+1.3
2,618,413	+				-0.8
2,618,413	+				-2.3
2,618,413	+				+0.7
2,618,413	+				+0.1
2,618,413	+				+0.3
2,618,421	-				-0.7
2,618,421	-				-0.4
2,618,421	-				-2.0
2,618,421	-				-0.4
2,618,421	-				-1.1
2,618,421	-				-1.8
2,618,421	-				-0.3
2,618,432	+				-1.2
2,618,432	+				-0.2
2,618,435	+				+2.7
2,618,440	-				+0.5
2,618,511	+				+0.1
2,618,533	-				+0.6
2,618,534	-				-2.1
2,618,635	-				+3.1
2,618,649	+				+0.3
2,618,657	-				+0.3
2,618,676	+				-1.2
2,618,717	+				-0.9
2,618,717	+				-0.5
2,618,717	+				-1.1
2,618,717	+				+0.4
2,618,725	-				+0.3
2,618,725	-				+1.8
2,618,725	-				+0.0
2,618,725	-				-2.4
2,618,725	-				+2.3
2,618,725	-				-1.3
2,618,738	-				-0.4
2,618,740	+				-0.2
2,618,740	+				-0.4
2,618,740	+				-1.0
2,618,740	+				+0.7
2,618,745	+				-0.3
2,618,745	+				-0.4
2,618,745	+				+1.2
2,618,745	+				-0.2
2,618,745	+				-1.4
2,618,745	+				+0.6
2,618,745	+				-0.0
2,618,745	+				+1.4
2,618,745	+				-1.0
2,618,745	+				-1.2
2,618,745	+				-0.6
2,618,745	+				+0.4
2,618,745	+				+0.1
2,618,745	+				-1.7
2,618,745	+				-1.8
2,618,748	-				-1.8
2,618,748	-				+1.1
2,618,748	-				-1.0
2,618,748	-				+2.5
2,618,748	-				+0.6
2,618,748	-				+1.2
2,618,753	-				+1.1
2,618,753	-				+0.8
2,618,753	-				-0.9
2,618,753	-				-1.1
2,618,753	-				-0.0
2,618,753	-				-1.5
2,618,753	-				+1.0
2,618,753	-				+1.1
2,618,754	-				+0.3
2,618,764	+				+0.8
2,618,764	+				+1.1
2,618,764	+				-1.8
2,618,764	+				-0.7
2,618,764	+				+0.3
2,618,764	+				-0.4
2,618,764	+				-0.7
2,618,764	+				-0.2
2,618,764	+				-0.8
2,618,764	+				+0.1
2,618,764	+				-0.1
2,618,764	+				-1.1
2,618,764	+				-2.1
2,618,764	+				-0.1
2,618,764	+				+2.8
2,618,764	+				-0.4
2,618,764	+				-0.5
2,618,764	+				-0.3
2,618,764	+				-2.2
2,618,764	+				-0.7
2,618,767	-				-0.2
2,618,772	-				+0.6
2,618,772	-				-0.3
2,618,772	-				+0.1
2,618,772	-				-1.9
2,618,772	-				+0.1
2,618,772	-				+0.8
2,618,772	-				+0.6
2,618,772	-				+0.0
2,618,772	-				-0.5
2,618,772	-				-1.8
2,618,772	-				-2.3
2,618,772	-				-0.6
2,618,772	-				-0.7
2,618,772	-				-0.6
2,618,772	-				+1.8
2,618,772	-				+0.8
2,618,772	-				-1.6
2,618,772	-				+0.6
2,618,772	-				+0.6
2,618,772	-				-0.9
2,618,772	-				+0.8
2,618,772	-				-0.6
2,618,772	-				-0.7
2,618,772	-				-1.9
2,618,772	-				+1.3
2,618,772	-				-2.1
2,618,772	-				+2.1
2,618,772	-				+1.8
2,618,775	+				+2.7
2,618,775	+				-0.3
2,618,775	+				+0.6
2,618,775	+				-0.8
2,618,788	+				+1.1
2,618,796	-				-0.8
2,618,798	+				-1.4
2,618,806	-				+0.7
2,618,806	-				-1.1
2,618,811	-				-0.4
2,618,811	-				+0.8
2,618,828	+				+0.6
2,618,828	+				+0.2
2,618,830	+				+1.3
2,618,833	+				-0.6
2,618,846	-				+0.3
2,618,847	+				+0.1
2,618,847	+				-0.4
2,618,849	-				-0.7
2,618,855	+				-2.6
2,618,860	+				+0.4
2,618,860	+				-2.3
2,618,860	+				-0.1
2,618,860	+				-0.2
2,618,860	+				+0.9
2,618,860	+				-2.1
2,618,863	-				+0.7
2,618,863	-				-0.3
2,618,863	-				+0.1
2,618,863	-				+0.3
2,618,865	+				+0.1
2,618,865	+				-0.9
2,618,867	+				+0.8
2,618,868	-				+1.0
2,618,868	-				-0.5
2,618,868	-				+0.9
2,618,868	-				-0.4
2,618,868	-				-1.7
2,618,868	-				+0.3
2,618,872	+				-1.4
2,618,873	-				-2.2
2,618,874	-				+2.3
2,618,874	-				+0.9
2,618,874	-				-0.1
2,618,874	-				-0.0
2,618,875	-				+0.4
2,618,879	+				+0.8
2,618,887	-				+0.6
2,618,889	+				+2.0
2,618,889	+				+0.8
2,618,889	+				+0.8
2,618,892	-				-1.3
2,618,892	-				+0.1
2,618,892	-				-1.6
2,618,897	-				-1.2
2,618,897	-				-0.2
2,618,897	-				-1.4
2,618,958	-				+0.1
2,618,960	-				+0.4
2,618,968	-				+0.8
2,619,011	-				+0.8
2,619,024	+				+0.2
2,619,029	-				-0.8
2,619,063	+				-0.1
2,619,073	-				+1.2
2,619,083	-				-0.7