Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02303

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,567,015	+		MIT1002_02302	0.70	-2.0
2,567,015	+		MIT1002_02302	0.70	+0.4
2,567,023	-		MIT1002_02302	0.71	+0.9
2,567,118	-		MIT1002_02302	0.73	+0.0
2,567,120	+		MIT1002_02302	0.73	+0.9
2,567,120	+		MIT1002_02302	0.73	-1.0
2,567,120	+		MIT1002_02302	0.73	-0.5
2,567,120	+		MIT1002_02302	0.73	+0.8
2,567,128	-		MIT1002_02302	0.74	+0.3
2,567,128	-		MIT1002_02302	0.74	+0.5
2,567,128	-		MIT1002_02302	0.74	+0.1
2,567,128	-		MIT1002_02302	0.74	+1.2
2,567,128	-		MIT1002_02302	0.74	+1.2
2,567,128	-		MIT1002_02302	0.74	-0.8
2,567,128	-		MIT1002_02302	0.74	+0.0
2,567,128	-		MIT1002_02302	0.74	+1.5
2,567,128	-		MIT1002_02302	0.74	-0.1
2,567,128	-		MIT1002_02302	0.74	+0.0
2,567,128	-		MIT1002_02302	0.74	+1.2
2,567,153	+		MIT1002_02302	0.74	+1.2
2,567,232	+		MIT1002_02302	0.77	+0.6
2,567,250	+		MIT1002_02302	0.77	+0.2
2,567,266	+		MIT1002_02302	0.78	-1.0
2,567,266	+		MIT1002_02302	0.78	+0.3
2,567,266	+		MIT1002_02302	0.78	-1.1
2,567,274	-		MIT1002_02302	0.78	+0.3
2,567,274	-		MIT1002_02302	0.78	+0.1
2,567,274	-		MIT1002_02302	0.78	+1.3
2,567,274	-		MIT1002_02302	0.78	+1.2
2,567,274	-		MIT1002_02302	0.78	+1.8
2,567,274	-		MIT1002_02302	0.78	-0.5
2,567,274	-		MIT1002_02302	0.78	-1.0
2,567,274	-		MIT1002_02302	0.78	+0.2
2,567,274	-		MIT1002_02302	0.78	+1.6
2,567,274	-		MIT1002_02302	0.78	-0.6
2,567,274	-		MIT1002_02302	0.78	-0.3
2,567,274	-		MIT1002_02302	0.78	+2.2
2,567,303	-		MIT1002_02302	0.79	+1.2
2,567,305	+		MIT1002_02302	0.79	+0.5
2,567,313	-		MIT1002_02302	0.79	+0.3
2,567,313	-		MIT1002_02302	0.79	+1.4
2,567,313	-		MIT1002_02302	0.79	+1.4
2,567,318	-		MIT1002_02302	0.79	-1.8
2,567,318	-		MIT1002_02302	0.79	+0.9
2,567,318	-		MIT1002_02302	0.79	+0.8
2,567,336	+		MIT1002_02302	0.80	+1.7
2,567,336	+		MIT1002_02302	0.80	-1.0
2,567,336	+		MIT1002_02302	0.80	+1.5
2,567,344	-		MIT1002_02302	0.80	+0.8
2,567,344	-		MIT1002_02302	0.80	+0.4
2,567,344	-		MIT1002_02302	0.80	+2.0
2,567,345	+		MIT1002_02302	0.80	-0.2
2,567,399	+		MIT1002_02302	0.82	-0.6
2,567,399	+		MIT1002_02302	0.82	+1.1
2,567,407	-		MIT1002_02302	0.82	-0.4
2,567,426	+		MIT1002_02302	0.83	+1.1
2,567,434	-		MIT1002_02302	0.83	+0.1
2,567,434	-		MIT1002_02302	0.83	+1.6
2,567,434	-		MIT1002_02302	0.83	+0.0
2,567,447	+		MIT1002_02302	0.83	+0.4
2,567,498	+		MIT1002_02302	0.85	+0.2
2,567,500	-		MIT1002_02302	0.85	-1.6
2,567,531	-		MIT1002_02302	0.86	+0.6
2,567,531	-		MIT1002_02302	0.86	+1.0
2,567,531	-		MIT1002_02302	0.86	-1.4
2,567,531	-		MIT1002_02302	0.86	-0.5
2,567,585	-		MIT1002_02302	0.87	-0.7
2,567,585	-		MIT1002_02302	0.87	-0.4
2,567,592	-		MIT1002_02302	0.87	+1.3
2,567,719	-				-0.3
2,567,760	+				-1.2
2,567,768	-				-1.9
2,567,768	-				+0.5
2,568,006	+				-1.0
2,568,024	-				+0.4
2,568,034	+				-2.0
2,568,121	-				+0.4
2,568,219	+				+0.0
2,568,292	+				+1.1
2,568,344	-		MIT1002_02303	0.10	+1.7
2,568,351	+		MIT1002_02303	0.11	+1.2
2,568,387	+		MIT1002_02303	0.12	-0.7
2,568,445	+		MIT1002_02303	0.14	+0.6
2,568,486	+		MIT1002_02303	0.15	+0.3
2,568,527	-		MIT1002_02303	0.16	+0.1
2,568,599	+		MIT1002_02303	0.18	-1.6
2,568,616	+		MIT1002_02303	0.19	-0.8
2,568,747	+		MIT1002_02303	0.23	-0.4
2,568,876	-		MIT1002_02303	0.27	+1.2
2,568,899	+		MIT1002_02303	0.28	+0.1
2,569,025	+		MIT1002_02303	0.32	+2.2
2,569,063	+		MIT1002_02303	0.33	-0.6
2,569,107	+		MIT1002_02303	0.34	-1.8
2,569,172	+		MIT1002_02303	0.36	+1.6
2,569,214	-		MIT1002_02303	0.38	-0.4
2,569,261	-		MIT1002_02303	0.39	+0.5
2,569,265	+		MIT1002_02303	0.39	-0.3
2,569,272	+		MIT1002_02303	0.40	+0.0
2,569,272	+		MIT1002_02303	0.40	+0.0
2,569,272	+		MIT1002_02303	0.40	-0.4
2,569,280	-		MIT1002_02303	0.40	+2.4
2,569,280	-		MIT1002_02303	0.40	-0.3
2,569,288	-		MIT1002_02303	0.40	+1.3
2,569,309	-		MIT1002_02303	0.41	-0.8
2,569,389	-		MIT1002_02303	0.43	-0.2
2,569,395	-		MIT1002_02303	0.43	+0.2
2,569,403	-		MIT1002_02303	0.44	-1.0
2,569,523	+		MIT1002_02303	0.47	+0.0
2,569,534	+		MIT1002_02303	0.48	+0.0
2,569,542	-		MIT1002_02303	0.48	+0.7
2,569,646	+		MIT1002_02303	0.51	+1.4
2,569,646	+		MIT1002_02303	0.51	-1.3
2,569,654	-		MIT1002_02303	0.52	+0.9
2,569,654	-		MIT1002_02303	0.52	+1.2
2,569,693	-		MIT1002_02303	0.53	-0.8
2,569,718	+		MIT1002_02303	0.54	-1.0
2,569,770	-		MIT1002_02303	0.55	+2.1
2,569,897	+		MIT1002_02303	0.59	+2.2
2,569,897	+		MIT1002_02303	0.59	+0.8
2,569,897	+		MIT1002_02303	0.59	-0.3
2,569,897	+		MIT1002_02303	0.59	+0.4
2,569,905	-		MIT1002_02303	0.59	+2.9
2,569,943	-		MIT1002_02303	0.61	+0.3
2,570,116	+		MIT1002_02303	0.66	+0.5
2,570,121	+		MIT1002_02303	0.66	-0.4
2,570,144	-		MIT1002_02303	0.67	+1.0
2,570,329	+		MIT1002_02303	0.73	-1.5
2,570,329	+		MIT1002_02303	0.73	+0.9
2,570,356	-		MIT1002_02303	0.74	+0.3
2,570,396	-		MIT1002_02303	0.75	+1.5
2,570,509	+		MIT1002_02303	0.78	-1.7
2,570,540	-		MIT1002_02303	0.79	+0.3
2,570,579	+		MIT1002_02303	0.81	-0.7
2,570,579	+		MIT1002_02303	0.81	-0.4
2,570,588	-		MIT1002_02303	0.81	+1.2
2,570,660	-		MIT1002_02303	0.83	+0.5
2,570,683	-		MIT1002_02303	0.84	+0.5
2,570,781	+		MIT1002_02303	0.87	+2.3
2,570,826	+		MIT1002_02303	0.88	+0.9
2,570,834	-		MIT1002_02303	0.89	-0.9
2,570,834	-		MIT1002_02303	0.89	-0.1
2,570,896	+				-0.3
2,570,916	-				+0.9
2,570,937	-				+0.8
2,570,947	-				-2.2
2,570,947	-				+0.1
2,570,947	-				+0.9
2,570,963	+				+0.8
2,571,017	+				+1.4
2,571,061	-				+0.3
2,571,077	+				-2.5
2,571,085	-				+0.0
2,571,270	+				+0.9
2,571,270	+				-1.0
2,571,270	+				+0.4
2,571,278	-				+0.7
2,571,278	-				+0.6
2,571,326	-				-0.9
2,571,346	-				+0.2
2,571,370	-		MIT1002_02304	0.14	-0.2
2,571,412	+		MIT1002_02304	0.27	+0.1
2,571,436	-		MIT1002_02304	0.34	-0.1
2,571,453	-		MIT1002_02304	0.39	+0.7
2,571,453	-		MIT1002_02304	0.39	-0.4
2,571,492	+		MIT1002_02304	0.50	+1.9
2,571,554	+		MIT1002_02304	0.68	-0.6
2,571,562	-		MIT1002_02304	0.70	+0.4
2,571,562	-		MIT1002_02304	0.70	+0.1
2,571,631	-				-0.0
2,571,731	+				-0.8
2,571,739	-				-1.9
2,571,739	-				-2.8
2,571,744	-				-1.0
2,571,793	-				-0.1
2,572,188	-		MIT1002_02305	0.13	+0.6