Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02286

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,548,737	+				-0.4
2,548,748	+				-2.3
2,548,756	-				-1.8
2,548,783	+				-0.1
2,548,783	+				-0.6
2,548,784	-				-1.6
2,548,791	-				+0.9
2,548,791	-				+0.8
2,548,791	-				+0.9
2,548,804	+				-0.5
2,548,812	-				-1.4
2,548,851	-				+0.7
2,548,853	+				-0.2
2,548,861	-				-1.0
2,548,873	+				+2.4
2,549,018	-				-0.0
2,549,024	-				-0.0
2,549,025	-				-0.3
2,549,030	-				-0.8
2,549,091	+				-0.4
2,549,099	-				+0.7
2,549,156	-		MIT1002_02285	0.15	+0.6
2,549,203	+		MIT1002_02285	0.30	+0.6
2,549,205	+		MIT1002_02285	0.31	-0.2
2,549,216	+		MIT1002_02285	0.34	+2.5
2,549,234	-		MIT1002_02285	0.40	-0.3
2,549,248	-		MIT1002_02285	0.45	-2.3
2,549,374	-		MIT1002_02285	0.85	+0.2
2,549,387	+		MIT1002_02285	0.90	+1.6
2,549,388	-				+0.8
2,549,399	+				+1.5
2,549,399	+				+0.6
2,549,399	+				-0.9
2,549,399	+				-2.4
2,549,399	+				+1.9
2,549,399	+				+0.5
2,549,399	+				+0.0
2,549,407	-				-0.8
2,549,407	-				+1.7
2,549,407	-				-0.5
2,549,407	-				-1.3
2,549,407	-				-0.7
2,549,407	-				+1.1
2,549,407	-				-0.1
2,549,489	-				-0.8
2,549,602	-				-2.1
2,549,657	-		MIT1002_02286	0.13	-1.0
2,549,675	+		MIT1002_02286	0.15	-0.1
2,549,675	+		MIT1002_02286	0.15	-2.3
2,549,675	+		MIT1002_02286	0.15	-1.1
2,549,675	+		MIT1002_02286	0.15	-1.3
2,549,675	+		MIT1002_02286	0.15	-1.0
2,549,675	+		MIT1002_02286	0.15	-1.1
2,549,675	+		MIT1002_02286	0.15	-1.3
2,549,683	-		MIT1002_02286	0.15	-1.7
2,549,683	-		MIT1002_02286	0.15	-2.7
2,549,683	-		MIT1002_02286	0.15	-3.8
2,549,683	-		MIT1002_02286	0.15	-2.3
2,549,683	-		MIT1002_02286	0.15	-3.2
2,549,683	-		MIT1002_02286	0.15	-2.2
2,549,746	+		MIT1002_02286	0.22	-2.1
2,549,844	-		MIT1002_02286	0.33	-1.4
2,549,844	-		MIT1002_02286	0.33	+2.6
2,549,884	+		MIT1002_02286	0.37	-2.9
2,549,931	-		MIT1002_02286	0.42	-3.2
2,549,937	+		MIT1002_02286	0.43	-1.3
2,550,030	+		MIT1002_02286	0.53	-2.6
2,550,113	+		MIT1002_02286	0.62	+1.2
2,550,251	+		MIT1002_02286	0.77	-0.4
2,550,254	-		MIT1002_02286	0.77	-1.9
2,550,347	+		MIT1002_02286	0.87	-4.7
2,550,347	+		MIT1002_02286	0.87	-1.5
2,550,355	-		MIT1002_02286	0.88	-2.0
2,550,355	-		MIT1002_02286	0.88	+1.9
2,550,375	-				-0.5
2,550,437	+				-2.7
2,550,608	+		MIT1002_02287	0.19	-3.4
2,550,631	-		MIT1002_02287	0.22	-2.7
2,550,684	+		MIT1002_02287	0.29	-1.6
2,550,826	+		MIT1002_02287	0.48	+0.6
2,550,834	-		MIT1002_02287	0.49	-1.5
2,550,834	-		MIT1002_02287	0.49	-2.2
2,550,854	-		MIT1002_02287	0.52	-2.6
2,550,913	-		MIT1002_02287	0.60	-1.2
2,550,980	-		MIT1002_02287	0.69	-3.1
2,550,985	+		MIT1002_02287	0.69	-2.3
2,550,985	+		MIT1002_02287	0.69	+1.2
2,550,985	+		MIT1002_02287	0.69	-0.3
2,550,997	+		MIT1002_02287	0.71	-2.3
2,551,005	+		MIT1002_02287	0.72	-3.4
2,551,114	-		MIT1002_02287	0.86	-4.0
2,551,129	+		MIT1002_02287	0.88	-0.6
2,551,129	+		MIT1002_02287	0.88	-3.3
2,551,134	+		MIT1002_02287	0.89	-2.2
2,551,137	-		MIT1002_02287	0.90	-1.8
2,551,137	-		MIT1002_02287	0.90	-1.6
2,551,142	-				-1.9
2,551,142	-				-1.6
2,551,143	-				-1.2
2,551,149	+				-2.0
2,551,155	+				-2.5
2,551,167	+				-4.0
2,551,168	-				-1.8
2,551,175	-				-2.4
2,551,224	+				+1.2
2,551,246	+				-0.2
2,551,254	-				-1.3
2,551,254	-				+0.4
2,551,324	+				-0.9
2,551,326	+				+0.3
2,551,332	-				-0.6
2,551,370	+				+0.5
2,551,410	+				-2.1
2,551,410	+				-0.4
2,551,417	-				+0.6
2,551,419	-				-1.3
2,551,456	+				+0.5
2,551,466	-				-1.6