Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02236

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,497,680	+		MIT1002_02235	0.16	+0.4
2,497,680	+		MIT1002_02235	0.16	+1.6
2,497,690	+		MIT1002_02235	0.16	+2.9
2,497,702	+		MIT1002_02235	0.17	-1.1
2,497,702	+		MIT1002_02235	0.17	+0.5
2,497,703	-		MIT1002_02235	0.18	-1.3
2,497,767	+		MIT1002_02235	0.23	+1.0
2,497,849	+		MIT1002_02235	0.30	-0.1
2,497,857	-		MIT1002_02235	0.31	-0.1
2,497,953	-		MIT1002_02235	0.39	+0.1
2,497,956	-		MIT1002_02235	0.39	-1.6
2,498,047	+		MIT1002_02235	0.47	+0.9
2,498,130	-		MIT1002_02235	0.54	-0.1
2,498,243	-		MIT1002_02235	0.63	-0.1
2,498,390	-		MIT1002_02235	0.76	+0.6
2,498,392	+		MIT1002_02235	0.76	-0.3
2,498,400	-		MIT1002_02235	0.76	+0.2
2,498,439	+		MIT1002_02235	0.80	+1.2
2,498,501	+		MIT1002_02235	0.85	-0.3
2,498,533	+		MIT1002_02235	0.88	+1.2
2,498,533	+		MIT1002_02235	0.88	-2.8
2,498,533	+		MIT1002_02235	0.88	+0.7
2,498,533	+		MIT1002_02235	0.88	+0.6
2,498,553	+		MIT1002_02235	0.89	+1.2
2,498,553	+		MIT1002_02235	0.89	-1.8
2,498,553	+		MIT1002_02235	0.89	+1.0
2,498,561	-				+0.3
2,498,631	+				-1.3
2,498,751	-				+0.9
2,498,838	+		MIT1002_02236	0.19	+1.2
2,498,846	-		MIT1002_02236	0.20	+2.1
2,498,846	-		MIT1002_02236	0.20	-1.7
2,499,059	+		MIT1002_02236	0.46	+1.4
2,499,144	+		MIT1002_02236	0.56	-1.1
2,499,149	+		MIT1002_02236	0.56	+1.3
2,499,275	-		MIT1002_02236	0.71	+2.7
2,499,275	-		MIT1002_02236	0.71	-1.0
2,499,326	-		MIT1002_02236	0.78	+0.5
2,499,480	-				-0.7
2,499,518	+				+0.2
2,499,650	-				-1.1
2,499,715	+				-0.4
2,499,732	+				-0.2
2,499,740	-				+0.6
2,499,740	-				-0.6
2,499,740	-				-0.5