Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02221

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,480,405	-		MIT1002_02219	0.69	-3.6
2,480,438	-		MIT1002_02219	0.72	-2.5
2,480,474	-		MIT1002_02219	0.75	+0.9
2,480,507	+		MIT1002_02219	0.78	+0.4
2,480,524	-		MIT1002_02219	0.80	+0.4
2,480,570	-		MIT1002_02219	0.85	-1.7
2,480,614	+		MIT1002_02219	0.89	-1.1
2,480,635	+				-1.9
2,480,643	-				-3.2
2,480,643	-				-2.3
2,480,758	-				-0.5
2,480,809	-		MIT1002_02220	0.13	-2.5
2,480,809	-		MIT1002_02220	0.13	-3.6
2,480,809	-		MIT1002_02220	0.13	-3.5
2,480,865	+		MIT1002_02220	0.21	-2.3
2,480,986	+		MIT1002_02220	0.40	-3.3
2,480,986	+		MIT1002_02220	0.40	-0.6
2,481,011	+		MIT1002_02220	0.44	-1.5
2,481,083	+		MIT1002_02220	0.55	-2.5
2,481,083	+		MIT1002_02220	0.55	-3.2
2,481,090	+		MIT1002_02220	0.56	-1.4
2,481,091	-		MIT1002_02220	0.56	-0.8
2,481,139	+		MIT1002_02220	0.63	-0.6
2,481,139	+		MIT1002_02220	0.63	-1.3
2,481,139	+		MIT1002_02220	0.63	-3.9
2,481,140	-		MIT1002_02220	0.63	-2.3
2,481,147	-		MIT1002_02220	0.65	-1.3
2,481,147	-		MIT1002_02220	0.65	-1.8
2,481,147	-		MIT1002_02220	0.65	-1.6
2,481,147	-		MIT1002_02220	0.65	+1.2
2,481,199	+		MIT1002_02220	0.73	-4.0
2,481,290	+		MIT1002_02220	0.86	-6.3
2,481,298	-		MIT1002_02220	0.88	-2.0
2,481,372	+				-0.7
2,481,397	+				-2.5
2,481,407	-				-3.1
2,481,435	+		MIT1002_02221	0.13	-1.1
2,481,458	+		MIT1002_02221	0.16	-2.0
2,481,458	+		MIT1002_02221	0.16	-2.2
2,481,458	+		MIT1002_02221	0.16	-0.6
2,481,458	+		MIT1002_02221	0.16	+0.1
2,481,458	+		MIT1002_02221	0.16	-0.9
2,481,466	-		MIT1002_02221	0.17	-1.8
2,481,479	+		MIT1002_02221	0.19	-3.0
2,481,499	-		MIT1002_02221	0.21	-1.9
2,481,499	-		MIT1002_02221	0.21	+0.4
2,481,589	-		MIT1002_02221	0.33	-2.2
2,481,589	-		MIT1002_02221	0.33	-1.1
2,481,655	+		MIT1002_02221	0.42	-0.6
2,481,674	+		MIT1002_02221	0.44	-0.7
2,481,702	-		MIT1002_02221	0.48	-2.5
2,481,893	+		MIT1002_02221	0.73	-1.7
2,482,205	+				+0.0
2,482,213	-				-0.2
2,482,213	-				-0.1
2,482,213	-				-1.1
2,482,223	-				+1.2
2,482,298	+				+1.3
2,482,308	-				+1.4
2,482,451	-				+0.7
2,482,451	-				-0.3
2,482,451	-				+1.1
2,482,576	+				-2.4
2,482,581	+				+0.3
2,482,589	-				-0.2
2,482,612	+				-0.3
2,482,630	-				-2.7
2,482,632	+				+0.5
2,482,744	-		MIT1002_02222	0.11	+1.9
2,482,753	+		MIT1002_02222	0.11	-1.1
2,482,768	+		MIT1002_02222	0.11	-1.4
2,482,857	+		MIT1002_02222	0.15	-3.3
2,482,857	-		MIT1002_02222	0.15	+1.6
2,482,865	-		MIT1002_02222	0.15	+0.9
2,482,878	+		MIT1002_02222	0.16	+0.0
2,483,009	-		MIT1002_02222	0.21	+0.3
2,483,009	-		MIT1002_02222	0.21	-0.0
2,483,081	-		MIT1002_02222	0.24	+0.0
2,483,096	+		MIT1002_02222	0.25	-0.3