Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02217

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,476,214	+		MIT1002_02216	0.54	+0.4
2,476,214	+		MIT1002_02216	0.54	+0.2
2,476,216	+		MIT1002_02216	0.54	-0.1
2,476,216	+		MIT1002_02216	0.54	+0.7
2,476,222	-		MIT1002_02216	0.55	-0.3
2,476,222	-		MIT1002_02216	0.55	-1.3
2,476,224	-		MIT1002_02216	0.55	-0.5
2,476,230	-		MIT1002_02216	0.55	+0.0
2,476,584	-		MIT1002_02216	0.73	-1.7
2,476,603	-		MIT1002_02216	0.74	-0.9
2,476,619	-		MIT1002_02216	0.75	+1.2
2,476,678	-		MIT1002_02216	0.78	+1.6
2,476,917	-				+0.4
2,476,924	-				-0.3
2,477,114	+				-0.5
2,477,134	+				+1.9
2,477,137	-				+1.2
2,477,144	+				-0.6
2,477,144	+				-0.1
2,477,152	-				+0.0
2,477,152	-				+1.9
2,477,198	+				-1.0
2,477,206	-				+1.2
2,477,268	+		MIT1002_02217	0.11	-0.1
2,477,330	-		MIT1002_02217	0.19	+0.5
2,477,342	+		MIT1002_02217	0.21	-0.9
2,477,362	+		MIT1002_02217	0.23	+0.2
2,477,378	-		MIT1002_02217	0.25	+0.4
2,477,475	-		MIT1002_02217	0.39	+0.1
2,477,523	-		MIT1002_02217	0.45	+0.1
2,477,715	-		MIT1002_02217	0.71	-0.7
2,477,811	+		MIT1002_02217	0.84	-0.7
2,477,819	-		MIT1002_02217	0.85	-1.4
2,478,019	-				-1.3
2,478,094	-		MIT1002_02218	0.11	+0.9
2,478,118	-		MIT1002_02218	0.13	+0.6
2,478,275	-		MIT1002_02218	0.23	-0.1
2,478,339	-		MIT1002_02218	0.28	+1.2
2,478,344	-		MIT1002_02218	0.28	+1.2
2,478,587	+		MIT1002_02218	0.45	-0.1
2,478,651	+		MIT1002_02218	0.49	-2.4
2,478,745	+		MIT1002_02218	0.56	+1.2