Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02141

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,401,057	+				+1.0
2,401,057	+				+0.0
2,401,171	+		MIT1002_02140	0.15	+1.0
2,401,187	+		MIT1002_02140	0.16	-0.5
2,401,187	+		MIT1002_02140	0.16	-1.6
2,401,241	-		MIT1002_02140	0.22	-1.3
2,401,354	+		MIT1002_02140	0.33	-0.5
2,401,354	+		MIT1002_02140	0.33	-0.9
2,401,354	+		MIT1002_02140	0.33	+0.9
2,401,354	+		MIT1002_02140	0.33	-0.4
2,401,362	-		MIT1002_02140	0.34	-1.3
2,401,362	-		MIT1002_02140	0.34	+1.9
2,401,378	+		MIT1002_02140	0.35	-0.3
2,401,383	+		MIT1002_02140	0.36	-0.9
2,401,384	-		MIT1002_02140	0.36	-0.9
2,401,386	-		MIT1002_02140	0.36	-1.9
2,401,396	-		MIT1002_02140	0.37	+1.2
2,401,404	+		MIT1002_02140	0.38	-0.9
2,401,412	-		MIT1002_02140	0.38	-1.2
2,401,481	+		MIT1002_02140	0.45	-0.9
2,401,488	+		MIT1002_02140	0.46	-1.2
2,401,489	+		MIT1002_02140	0.46	-1.9
2,401,496	-		MIT1002_02140	0.47	+0.2
2,401,755	+		MIT1002_02140	0.72	+0.2
2,401,763	-		MIT1002_02140	0.73	-1.2
2,401,841	+		MIT1002_02140	0.80	-2.7
2,401,859	-		MIT1002_02140	0.82	-0.1
2,401,865	+		MIT1002_02140	0.83	-0.9
2,401,944	+				+1.8
2,401,962	+				-2.4
2,401,962	+				-2.4
2,401,964	+				+1.7
2,401,980	-				+1.0
2,401,996	-				+0.6
2,402,100	+				-1.7
2,402,108	-				-1.3
2,402,108	-				-1.7
2,402,108	-				-0.8
2,402,108	-				+0.1
2,402,312	+		MIT1002_02141	0.40	-1.1
2,402,312	+		MIT1002_02141	0.40	-0.5
2,402,312	+		MIT1002_02141	0.40	+0.4
2,402,312	+		MIT1002_02141	0.40	+0.2
2,402,312	+		MIT1002_02141	0.40	+0.5
2,402,320	-		MIT1002_02141	0.41	-1.3
2,402,322	+		MIT1002_02141	0.41	-1.4
2,402,330	-		MIT1002_02141	0.42	-0.5
2,402,463	+		MIT1002_02141	0.63	-0.7
2,402,471	-		MIT1002_02141	0.64	+2.8
2,402,471	-		MIT1002_02141	0.64	-1.5
2,402,806	+		MIT1002_02142	0.13	+0.2
2,402,869	+		MIT1002_02142	0.21	+0.4
2,402,903	-		MIT1002_02142	0.26	+2.2
2,402,941	-		MIT1002_02142	0.30	+2.6
2,402,980	-		MIT1002_02142	0.35	+0.8
2,402,981	+		MIT1002_02142	0.35	-0.8
2,402,981	-		MIT1002_02142	0.35	-2.4
2,402,981	-		MIT1002_02142	0.35	-1.0
2,402,981	-		MIT1002_02142	0.35	+0.8
2,403,039	+		MIT1002_02142	0.43	-0.1
2,403,047	-		MIT1002_02142	0.44	+0.4
2,403,150	-		MIT1002_02142	0.57	-1.6
2,403,334	-		MIT1002_02142	0.80	+0.5
2,403,345	+		MIT1002_02142	0.81	-1.0
2,403,502	-				+0.2
2,403,555	+				-1.8
2,403,563	-		MIT1002_02143	0.11	-0.8
2,403,629	-		MIT1002_02143	0.20	-0.9