Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02026

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,266,637	+		MIT1002_02025	0.60	-1.0
2,266,701	+		MIT1002_02025	0.63	-2.4
2,266,740	+		MIT1002_02025	0.65	+0.6
2,266,821	+		MIT1002_02025	0.69	+0.9
2,266,859	+		MIT1002_02025	0.71	+0.0
2,266,935	+		MIT1002_02025	0.75	-0.6
2,266,950	+		MIT1002_02025	0.75	-0.7
2,267,109	+		MIT1002_02025	0.83	-0.5
2,267,111	+		MIT1002_02025	0.83	+1.2
2,267,472	+				+1.2
2,267,697	+		MIT1002_02026	0.12	+0.4
2,267,700	-		MIT1002_02026	0.12	+1.2
2,267,700	-		MIT1002_02026	0.12	-1.1
2,267,761	+		MIT1002_02026	0.17	-0.9
2,267,811	+		MIT1002_02026	0.21	-1.0
2,267,811	+		MIT1002_02026	0.21	-0.9
2,267,811	+		MIT1002_02026	0.21	+0.0
2,267,813	+		MIT1002_02026	0.21	+0.2
2,267,827	-		MIT1002_02026	0.22	-1.5
2,267,846	+		MIT1002_02026	0.23	+0.4
2,267,846	+		MIT1002_02026	0.23	+1.9
2,267,874	-		MIT1002_02026	0.25	-1.2
2,267,885	+		MIT1002_02026	0.26	-0.4
2,268,022	+		MIT1002_02026	0.37	-0.2
2,268,027	+		MIT1002_02026	0.37	-0.5
2,268,047	+		MIT1002_02026	0.38	-1.8
2,268,179	+		MIT1002_02026	0.48	+1.4
2,268,206	+		MIT1002_02026	0.50	-1.2
2,268,223	+		MIT1002_02026	0.52	-1.1
2,268,223	+		MIT1002_02026	0.52	-0.6
2,268,231	+		MIT1002_02026	0.52	-2.3
2,268,273	+		MIT1002_02026	0.55	+0.4
2,268,344	+		MIT1002_02026	0.61	+0.4
2,268,396	-		MIT1002_02026	0.65	-1.1
2,268,430	+		MIT1002_02026	0.67	+2.0
2,268,472	-		MIT1002_02026	0.70	-1.8
2,268,605	+		MIT1002_02026	0.80	-1.5
2,268,674	-		MIT1002_02026	0.85	-1.0
2,268,758	-				-1.6
2,268,773	+				-0.2
2,268,804	-				+0.7
2,268,815	-				+0.0
2,268,840	+				-0.4
2,269,056	+				+0.2
2,269,064	-				+0.1
2,269,073	-				-0.3
2,269,168	+		MIT1002_02027	0.15	-0.8
2,269,168	+		MIT1002_02027	0.15	-1.3
2,269,168	+		MIT1002_02027	0.15	-0.5
2,269,170	+		MIT1002_02027	0.16	-0.1
2,269,278	-		MIT1002_02027	0.23	-0.5
2,269,278	-		MIT1002_02027	0.23	+1.2
2,269,353	-		MIT1002_02027	0.28	+0.3
2,269,365	+		MIT1002_02027	0.29	-1.0
2,269,583	+		MIT1002_02027	0.43	+0.2
2,269,583	+		MIT1002_02027	0.43	-1.4
2,269,583	+		MIT1002_02027	0.43	+2.8
2,269,591	-		MIT1002_02027	0.44	-0.7
2,269,609	+		MIT1002_02027	0.45	+0.7
2,269,609	+		MIT1002_02027	0.45	+0.0
2,269,609	+		MIT1002_02027	0.45	-3.2
2,269,609	+		MIT1002_02027	0.45	+0.9
2,269,800	+		MIT1002_02027	0.58	-0.0
2,269,849	+		MIT1002_02027	0.62	+0.4