Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01833

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,041,284	+				-0.5
2,041,360	-				+0.3
2,041,384	+				+0.8
2,041,392	-				-2.3
2,041,392	-				-1.5
2,041,395	+				-0.1
2,041,428	-				-1.2
2,041,434	-				-2.9
2,041,453	-				+0.8
2,041,472	+				-0.5
2,041,499	-				+2.2
2,041,580	+				-0.7
2,041,774	+		MIT1002_01832	0.18	-0.1
2,041,795	-		MIT1002_01832	0.27	-2.4
2,041,835	+		MIT1002_01832	0.46	+0.6
2,041,930	-		MIT1002_01832	0.89	-1.0
2,041,955	-				+0.6
2,041,988	+				+0.4
2,041,990	-				+0.2
2,041,998	+				+0.9
2,042,006	-				-2.1
2,042,202	-				-2.3
2,042,301	+		MIT1002_01833	0.32	-3.1
2,042,370	-		MIT1002_01833	0.54	+0.2
2,042,383	-		MIT1002_01833	0.58	-1.2
2,042,456	+		MIT1002_01833	0.81	-0.9
2,042,464	-		MIT1002_01833	0.83	+1.2
2,042,488	+				-1.8
2,042,504	-				-1.8
2,042,519	-				-2.4
2,042,610	+				-1.7
2,042,758	+				-2.0
2,042,759	+				-4.1
2,042,839	+		MIT1002_01834	0.13	-1.9
2,042,844	+		MIT1002_01834	0.13	-2.2
2,042,852	-		MIT1002_01834	0.14	-1.6
2,042,985	+		MIT1002_01834	0.19	-0.5
2,043,026	-		MIT1002_01834	0.21	+0.9
2,043,127	-		MIT1002_01834	0.26	-1.7
2,043,139	+		MIT1002_01834	0.26	-2.8
2,043,250	-		MIT1002_01834	0.31	-3.6
2,043,296	-		MIT1002_01834	0.33	-0.9
2,043,311	+		MIT1002_01834	0.34	-3.1
2,043,475	-		MIT1002_01834	0.41	-3.2
2,043,497	+		MIT1002_01834	0.42	-5.3
2,043,497	+		MIT1002_01834	0.42	-3.0
2,043,497	+		MIT1002_01834	0.42	+0.9
2,043,497	+		MIT1002_01834	0.42	-2.4
2,043,497	+		MIT1002_01834	0.42	-2.8
2,043,497	+		MIT1002_01834	0.42	-0.4
2,043,505	-		MIT1002_01834	0.42	-1.3
2,043,505	-		MIT1002_01834	0.42	-2.2