Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01824

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
2,031,066	-				-0.1
2,031,153	+		MIT1002_01822	0.13	+0.5
2,031,249	+		MIT1002_01822	0.36	-1.2
2,031,420	+		MIT1002_01822	0.77	-0.7
2,031,531	+				-0.2
2,031,539	-				-0.2
2,031,560	+				+0.3
2,031,621	+		MIT1002_01823	0.13	-0.0
2,031,629	-		MIT1002_01823	0.15	-2.3
2,031,751	-		MIT1002_01823	0.41	+0.8
2,031,887	-		MIT1002_01823	0.71	+0.9
2,031,957	+		MIT1002_01823	0.86	+1.1
2,032,034	+				+0.2
2,032,042	-				+0.4
2,032,080	-				-0.5
2,032,109	+				+0.6
2,032,131	-				+0.6
2,032,157	-		MIT1002_01824	0.11	-0.1
2,032,217	+		MIT1002_01824	0.16	+1.0
2,032,225	-		MIT1002_01824	0.17	-1.4
2,032,225	-		MIT1002_01824	0.17	+0.3
2,032,229	+		MIT1002_01824	0.17	+0.5
2,032,268	+		MIT1002_01824	0.20	+2.0
2,032,278	-		MIT1002_01824	0.21	+1.5
2,032,342	+		MIT1002_01824	0.27	+0.7
2,032,400	+		MIT1002_01824	0.32	-0.9
2,032,408	-		MIT1002_01824	0.32	+0.1
2,032,408	-		MIT1002_01824	0.32	-1.3
2,032,413	+		MIT1002_01824	0.33	+0.3
2,032,456	+		MIT1002_01824	0.37	-0.6
2,032,464	-		MIT1002_01824	0.37	-0.3
2,032,469	-		MIT1002_01824	0.38	-1.8
2,032,526	-		MIT1002_01824	0.43	-0.5
2,032,554	-		MIT1002_01824	0.45	-0.9
2,032,573	+		MIT1002_01824	0.47	-3.2
2,032,576	-		MIT1002_01824	0.47	-1.6
2,032,612	+		MIT1002_01824	0.50	+1.0
2,032,612	+		MIT1002_01824	0.50	-1.0
2,032,632	-		MIT1002_01824	0.52	-1.6
2,032,654	+		MIT1002_01824	0.53	+0.9
2,032,662	-		MIT1002_01824	0.54	+0.8
2,032,745	+		MIT1002_01824	0.61	+1.2
2,032,808	-		MIT1002_01824	0.67	+0.5
2,032,881	+		MIT1002_01824	0.73	+3.1
2,032,915	+		MIT1002_01824	0.76	-2.6
2,033,053	-		MIT1002_01824	0.88	+2.2
2,033,247	-				-0.7
2,033,287	-				-0.6
2,033,374	-				+0.3
2,033,412	-				-0.2
2,033,465	+				+1.1
2,033,543	+				-0.3
2,033,549	+				+0.9
2,033,551	-				-1.2
2,033,578	-				+0.1
2,033,676	+		MIT1002_01825	0.15	+1.5
2,033,688	+		MIT1002_01825	0.16	-0.8
2,033,733	+		MIT1002_01825	0.22	+1.0
2,033,789	+		MIT1002_01825	0.28	+0.4
2,033,790	+		MIT1002_01825	0.29	+0.8
2,033,817	+		MIT1002_01825	0.32	+0.9
2,033,834	-		MIT1002_01825	0.34	-1.7
2,033,837	-		MIT1002_01825	0.34	-0.9
2,033,863	-		MIT1002_01825	0.37	-0.3
2,033,976	-		MIT1002_01825	0.51	+0.1
2,033,986	+		MIT1002_01825	0.52	-0.3
2,033,994	-		MIT1002_01825	0.53	-0.1
2,033,994	-		MIT1002_01825	0.53	+0.9
2,034,020	+		MIT1002_01825	0.56	-0.3
2,034,029	+		MIT1002_01825	0.57	-0.6
2,034,051	-		MIT1002_01825	0.60	-0.6
2,034,051	-		MIT1002_01825	0.60	-1.4
2,034,056	-		MIT1002_01825	0.60	+0.8
2,034,056	-		MIT1002_01825	0.60	-0.7
2,034,173	-		MIT1002_01825	0.74	+2.3
2,034,173	-		MIT1002_01825	0.74	-1.3