Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01662

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,835,772	+				-0.1
1,835,772	+				-0.1
1,835,772	+				+0.4
1,835,780	-				+0.6
1,835,780	-				+0.2
1,835,780	-				-1.9
1,835,780	-				-0.9
1,835,788	-				-0.4
1,835,800	-				-1.2
1,835,941	+				-1.5
1,835,949	-				-0.1
1,835,949	-				-1.5
1,835,949	-				+0.2
1,835,954	-				-0.2
1,835,954	-				+2.2
1,836,077	+				+0.4
1,836,085	-				-0.2
1,836,177	+				+1.2
1,836,291	+				+0.2
1,836,311	+				-0.6
1,836,319	-				+2.6
1,836,319	-				-1.4
1,836,444	+				+1.1
1,836,537	+				-1.1
1,836,596	-				-2.0
1,836,607	+				-4.1
1,836,741	+		MIT1002_01662	0.34	-3.1
1,836,778	+		MIT1002_01662	0.40	-0.7
1,836,793	+		MIT1002_01662	0.43	-2.2
1,836,803	+		MIT1002_01662	0.45	-3.3
1,836,859	+		MIT1002_01662	0.56	-1.4
1,836,869	-		MIT1002_01662	0.57	-1.9
1,836,871	+		MIT1002_01662	0.58	-2.4
1,836,910	+		MIT1002_01662	0.65	-1.2
1,836,955	+		MIT1002_01662	0.74	-0.1
1,836,955	+		MIT1002_01662	0.74	-0.7
1,836,987	+		MIT1002_01662	0.80	+0.4
1,837,007	+		MIT1002_01662	0.83	-1.7
1,837,141	-				-0.1
1,837,166	+				+0.1
1,837,336	-		MIT1002_01663	0.14	+0.4
1,837,384	+		MIT1002_01663	0.18	-2.6
1,837,392	-		MIT1002_01663	0.19	-1.0
1,837,392	-		MIT1002_01663	0.19	-0.4
1,837,618	-		MIT1002_01663	0.39	+0.5
1,837,725	-		MIT1002_01663	0.48	+1.1
1,837,754	-		MIT1002_01663	0.50	-0.0
1,837,756	+		MIT1002_01663	0.51	-0.8
1,837,768	+		MIT1002_01663	0.52	+0.4
1,837,768	+		MIT1002_01663	0.52	+0.2
1,837,846	-		MIT1002_01663	0.58	+0.6
1,837,926	+		MIT1002_01663	0.65	-1.2
1,838,027	+		MIT1002_01663	0.74	+0.3
1,838,061	+		MIT1002_01663	0.77	-0.9
1,838,069	-		MIT1002_01663	0.78	-0.8
1,838,069	-		MIT1002_01663	0.78	+0.6
1,838,090	-		MIT1002_01663	0.79	+1.2
1,838,092	+		MIT1002_01663	0.80	+0.1