Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01656

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,827,832	+				-0.3
1,827,883	+		MIT1002_01654	0.16	-0.5
1,827,886	-		MIT1002_01654	0.17	+0.8
1,827,891	-		MIT1002_01654	0.18	-1.0
1,827,901	+		MIT1002_01654	0.21	+1.2
1,827,945	+		MIT1002_01654	0.32	+1.0
1,827,945	+		MIT1002_01654	0.32	-3.4
1,827,945	+		MIT1002_01654	0.32	+1.4
1,827,945	+		MIT1002_01654	0.32	-0.7
1,827,945	+		MIT1002_01654	0.32	+0.3
1,827,953	-		MIT1002_01654	0.34	-0.8
1,827,953	-		MIT1002_01654	0.34	-0.7
1,827,953	-		MIT1002_01654	0.34	+1.5
1,827,953	-		MIT1002_01654	0.34	-0.4
1,827,953	-		MIT1002_01654	0.34	-2.7
1,828,079	+		MIT1002_01654	0.66	-0.7
1,828,139	+		MIT1002_01654	0.81	-0.1
1,828,156	+		MIT1002_01654	0.85	+1.4
1,828,158	+		MIT1002_01654	0.86	-0.4
1,828,192	+				+1.9
1,828,219	+				+3.0
1,828,219	+				-0.8
1,828,219	+				-1.9
1,828,220	+				+0.4
1,828,228	-				-1.8
1,828,286	-		MIT1002_01655	0.14	-1.0
1,828,380	-		MIT1002_01655	0.38	-0.7
1,828,388	+		MIT1002_01655	0.40	+1.5
1,828,414	+		MIT1002_01655	0.47	-0.6
1,828,507	-		MIT1002_01655	0.70	+2.5
1,828,562	+		MIT1002_01655	0.84	+0.2
1,828,562	+		MIT1002_01655	0.84	-0.1
1,828,567	+		MIT1002_01655	0.85	-0.3
1,828,681	-				+0.3
1,828,732	+				+1.4
1,828,763	-				+0.9
1,828,763	-				+0.1
1,828,881	-		MIT1002_01656	0.18	+0.2
1,828,894	+		MIT1002_01656	0.19	-1.9
1,828,943	-		MIT1002_01656	0.23	-0.1
1,828,959	+		MIT1002_01656	0.24	-0.1
1,828,967	-		MIT1002_01656	0.25	+0.1
1,829,047	+		MIT1002_01656	0.31	-2.5
1,829,052	+		MIT1002_01656	0.32	+0.2
1,829,052	+		MIT1002_01656	0.32	+0.7
1,829,060	-		MIT1002_01656	0.32	+0.1
1,829,060	-		MIT1002_01656	0.32	+1.7
1,829,060	-		MIT1002_01656	0.32	-1.0
1,829,103	+		MIT1002_01656	0.36	+1.6
1,829,111	+		MIT1002_01656	0.36	+1.5
1,829,132	-		MIT1002_01656	0.38	+1.9
1,829,220	+		MIT1002_01656	0.45	+0.5
1,829,259	-		MIT1002_01656	0.48	-0.6
1,829,378	-		MIT1002_01656	0.57	-0.5
1,829,428	-		MIT1002_01656	0.61	-0.7
1,829,486	-		MIT1002_01656	0.65	+0.0
1,829,528	+		MIT1002_01656	0.68	-0.6
1,829,552	-		MIT1002_01656	0.70	-1.8
1,829,560	-		MIT1002_01656	0.71	+0.3
1,829,672	+		MIT1002_01656	0.80	-0.2
1,829,680	-		MIT1002_01656	0.80	+0.5
1,829,680	-		MIT1002_01656	0.80	-0.0
1,829,686	+		MIT1002_01656	0.81	-0.5
1,829,786	+		MIT1002_01656	0.88	+0.2
1,829,904	+				+1.7
1,829,911	+				-0.9
1,829,979	+				-2.7
1,830,057	-				+0.4
1,830,161	-				+0.4
1,830,171	-				-1.5
1,830,206	+				-0.3
1,830,349	+				-0.1
1,830,385	-				-1.7
1,830,558	+		MIT1002_01657	0.16	-0.1
1,830,589	-		MIT1002_01657	0.20	-1.1
1,830,672	-		MIT1002_01657	0.29	-1.4
1,830,681	+		MIT1002_01657	0.30	+1.2
1,830,681	+		MIT1002_01657	0.30	-1.0
1,830,689	-		MIT1002_01657	0.31	-1.5
1,830,709	+		MIT1002_01657	0.34	-1.9
1,830,755	+		MIT1002_01657	0.39	-2.2