Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01544

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,697,113	-		MIT1002_01542	0.56	-0.7
1,697,114	-		MIT1002_01542	0.56	+0.8
1,697,140	-		MIT1002_01542	0.58	-0.5
1,697,173	+		MIT1002_01542	0.60	-2.7
1,697,255	+		MIT1002_01542	0.67	-0.9
1,697,275	+		MIT1002_01542	0.68	+0.2
1,697,324	+		MIT1002_01542	0.72	-0.2
1,697,332	-		MIT1002_01542	0.73	+0.5
1,697,372	-		MIT1002_01542	0.76	-0.5
1,697,398	-		MIT1002_01542	0.78	-1.3
1,697,403	-		MIT1002_01542	0.79	+0.2
1,697,407	+		MIT1002_01542	0.79	+0.1
1,697,407	+		MIT1002_01542	0.79	+2.0
1,697,415	-		MIT1002_01542	0.80	+0.0
1,697,415	-		MIT1002_01542	0.80	-0.3
1,697,492	-		MIT1002_01542	0.86	+1.5
1,697,575	-				-2.2
1,697,591	+				-0.6
1,697,612	+				-1.0
1,697,640	+				-0.8
1,697,672	+				+0.4
1,697,693	+				-0.4
1,697,741	+				-1.9
1,697,848	+				+1.8
1,697,853	+				-0.7
1,697,861	-				+1.2
1,697,882	+				+2.0
1,697,882	-				-0.7
1,697,908	+		MIT1002_01543	0.21	-0.3
1,697,936	+		MIT1002_01543	0.34	+0.9
1,698,014	-		MIT1002_01543	0.69	-1.1
1,698,014	-		MIT1002_01543	0.69	+0.4
1,698,046	-		MIT1002_01543	0.83	+0.9
1,698,103	-				-0.6
1,698,103	-				-0.0
1,698,109	+				+0.1
1,698,255	-		MIT1002_01544	0.23	+1.3
1,698,323	-		MIT1002_01544	0.33	-0.4
1,698,345	+		MIT1002_01544	0.36	-0.8
1,698,387	+		MIT1002_01544	0.43	+0.1
1,698,395	-		MIT1002_01544	0.44	-5.6
1,698,406	+		MIT1002_01544	0.45	+0.5
1,698,422	-		MIT1002_01544	0.48	-0.7
1,698,446	+		MIT1002_01544	0.51	-0.6
1,698,469	+		MIT1002_01544	0.55	-6.0
1,698,482	-		MIT1002_01544	0.57	-5.6
1,698,482	-		MIT1002_01544	0.57	-3.3
1,698,502	-		MIT1002_01544	0.59	-0.5
1,698,550	-		MIT1002_01544	0.67	+0.1
1,698,566	-		MIT1002_01544	0.69	-2.1
1,698,636	+		MIT1002_01544	0.79	-0.2
1,698,702	+		MIT1002_01544	0.89	+0.7
1,698,710	-				+0.7
1,698,712	-				+0.1
1,698,747	-				-0.2