Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01466

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,620,777	+				-1.1
1,620,937	+				-3.5
1,620,945	-				-1.3
1,620,947	-				-2.1
1,621,262	+		MIT1002_01466	0.21	-1.9
1,621,267	+		MIT1002_01466	0.22	+0.5
1,621,272	+		MIT1002_01466	0.22	-1.1
1,621,280	-		MIT1002_01466	0.23	-2.1
1,621,359	+		MIT1002_01466	0.29	-1.2
1,621,493	+		MIT1002_01466	0.40	-1.8
1,621,579	+		MIT1002_01466	0.47	-4.2
1,621,612	+		MIT1002_01466	0.49	-1.8
1,621,638	+		MIT1002_01466	0.51	-0.7
1,621,661	+		MIT1002_01466	0.53	-1.9
1,621,669	-		MIT1002_01466	0.54	-0.9
1,621,672	+		MIT1002_01466	0.54	-2.7
1,621,766	+		MIT1002_01466	0.61	-1.9
1,621,773	-		MIT1002_01466	0.62	+0.1
1,621,805	-		MIT1002_01466	0.64	-1.0
1,621,846	+		MIT1002_01466	0.68	-2.3
1,621,854	-		MIT1002_01466	0.68	-1.3
1,621,854	-		MIT1002_01466	0.68	-2.8
1,621,905	+		MIT1002_01466	0.72	-2.6
1,621,916	-		MIT1002_01466	0.73	-3.2
1,622,021	+		MIT1002_01466	0.81	-1.7
1,622,025	+		MIT1002_01466	0.82	-2.3
1,622,174	+				-2.7
1,622,182	-				-0.2
1,622,315	+				-3.8
1,622,320	+				-1.6
1,622,419	-				-1.4
1,622,561	-				-0.5
1,622,567	-				-2.9
1,622,611	-		MIT1002_01467	0.11	-3.7
1,622,738	+		MIT1002_01467	0.15	-2.6
1,622,748	-		MIT1002_01467	0.15	-0.6
1,622,790	+		MIT1002_01467	0.16	+0.1
1,622,903	+		MIT1002_01467	0.20	-4.6
1,622,995	+		MIT1002_01467	0.23	-1.3
1,623,006	+		MIT1002_01467	0.23	-1.6
1,623,009	+		MIT1002_01467	0.23	-0.7
1,623,020	+		MIT1002_01467	0.23	+1.3
1,623,074	+		MIT1002_01467	0.25	-0.8
1,623,082	-		MIT1002_01467	0.25	-1.4
1,623,084	-		MIT1002_01467	0.25	-0.4
1,623,123	+		MIT1002_01467	0.27	-2.3
1,623,123	+		MIT1002_01467	0.27	-1.7
1,623,123	+		MIT1002_01467	0.27	-1.7
1,623,252	+		MIT1002_01467	0.31	-1.2
1,623,254	+		MIT1002_01467	0.31	-1.8