Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01430

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,573,133	-		MIT1002_01428	0.89	-1.6
1,573,164	-				-0.7
1,573,250	-				-1.3
1,573,394	-		MIT1002_01429	0.24	-1.0
1,573,415	+		MIT1002_01429	0.28	+0.2
1,573,458	-		MIT1002_01429	0.35	-2.3
1,573,494	-		MIT1002_01429	0.40	-2.3
1,573,533	+		MIT1002_01429	0.46	+0.3
1,573,664	+		MIT1002_01429	0.67	-3.4
1,573,681	-		MIT1002_01429	0.70	-1.7
1,573,740	-		MIT1002_01429	0.79	-2.5
1,573,792	-		MIT1002_01429	0.87	+1.0
1,573,792	-		MIT1002_01429	0.87	-0.8
1,573,792	-		MIT1002_01429	0.87	-2.5
1,573,812	+				-1.8
1,573,937	-				-3.1
1,573,975	-				-1.3
1,574,024	+				+0.5
1,574,032	-				-2.3
1,574,075	-		MIT1002_01430	0.12	-3.5
1,574,207	+		MIT1002_01430	0.19	-0.6
1,574,238	+		MIT1002_01430	0.21	-1.6
1,574,284	+		MIT1002_01430	0.24	-1.6
1,574,318	+		MIT1002_01430	0.26	-0.4
1,574,410	+		MIT1002_01430	0.31	-1.3
1,574,417	-		MIT1002_01430	0.31	-1.8
1,574,419	+		MIT1002_01430	0.32	-1.2
1,574,419	+		MIT1002_01430	0.32	-0.8
1,574,427	-		MIT1002_01430	0.32	-1.5
1,574,429	+		MIT1002_01430	0.32	+1.0
1,574,437	-		MIT1002_01430	0.33	-2.1
1,574,477	+		MIT1002_01430	0.35	-1.3
1,574,544	-		MIT1002_01430	0.39	-1.1
1,574,585	+		MIT1002_01430	0.41	-2.0
1,574,640	+		MIT1002_01430	0.44	-1.4
1,574,648	-		MIT1002_01430	0.45	-1.4
1,574,732	-		MIT1002_01430	0.49	+0.2
1,575,022	-		MIT1002_01430	0.66	-0.6
1,575,064	-		MIT1002_01430	0.68	-0.9
1,575,140	+		MIT1002_01430	0.73	-1.1
1,575,427	+		MIT1002_01430	0.89	-2.7
1,575,427	+		MIT1002_01430	0.89	-0.8
1,575,427	+		MIT1002_01430	0.89	+0.2
1,575,544	+				-1.9
1,575,573	+				-0.1
1,575,579	+				+0.3
1,575,596	+				-0.9
1,575,701	-				+0.3
1,575,701	-				-2.5
1,575,703	-				-3.9
1,575,722	-				-1.8
1,575,724	-				-1.1
1,575,763	-				+2.9
1,575,912	-				-2.6
1,575,953	+				-1.4
1,575,953	+				+1.0
1,575,953	+				+0.7
1,576,107	-		MIT1002_01431	0.25	+1.4
1,576,143	-		MIT1002_01431	0.29	-0.7
1,576,282	+		MIT1002_01431	0.45	-1.3
1,576,287	+		MIT1002_01431	0.46	+1.0
1,576,290	-		MIT1002_01431	0.46	-0.6
1,576,351	+		MIT1002_01431	0.53	-1.9
1,576,428	-		MIT1002_01431	0.62	+0.3
1,576,461	+		MIT1002_01431	0.66	-0.8
1,576,464	-		MIT1002_01431	0.66	-2.0
1,576,465	-		MIT1002_01431	0.66	-0.8
1,576,518	+		MIT1002_01431	0.73	+1.1
1,576,526	-		MIT1002_01431	0.74	+0.4
1,576,606	+		MIT1002_01431	0.83	-0.6