Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01422

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,566,000	+				-3.9
1,566,025	+				-2.9
1,566,025	+				-1.1
1,566,033	-				-2.2
1,566,171	+				-0.7
1,566,310	+		MIT1002_01421	0.28	-0.5
1,566,328	-		MIT1002_01421	0.31	-0.0
1,566,363	-		MIT1002_01421	0.36	+1.0
1,566,395	-		MIT1002_01421	0.40	-0.4
1,566,492	+		MIT1002_01421	0.55	-0.7
1,566,500	-		MIT1002_01421	0.56	+0.1
1,566,502	+		MIT1002_01421	0.56	+3.0
1,566,541	-		MIT1002_01421	0.62	+0.5
1,566,613	+		MIT1002_01421	0.73	-0.1
1,566,666	-		MIT1002_01421	0.81	-0.2
1,566,682	+		MIT1002_01421	0.83	+1.0
1,566,713	+		MIT1002_01421	0.88	-0.7
1,566,721	-		MIT1002_01421	0.89	+1.3
1,566,796	+				+0.0
1,566,930	+		MIT1002_01422	0.49	-1.6
1,566,996	+		MIT1002_01422	0.73	-5.7
1,567,012	+		MIT1002_01422	0.79	-4.2
1,567,012	+		MIT1002_01422	0.79	-2.5
1,567,012	+		MIT1002_01422	0.79	-5.1
1,567,110	-				-0.2
1,567,120	-				+1.1
1,567,253	+				+0.4
1,567,271	+				+1.5
1,567,332	+				+0.4
1,567,472	+				+0.2
1,567,473	-				-1.6
1,567,486	+				+0.1
1,567,486	+				+1.2
1,567,486	+				-2.1
1,567,494	-				+1.3
1,567,496	+				+1.5
1,567,512	-				+0.4
1,567,514	+				-2.5
1,567,601	+				-0.1
1,567,601	+				-2.1
1,567,641	+				-0.1
1,567,679	+				+1.2
1,567,745	+				+1.6
1,567,753	-		MIT1002_01423	0.12	-1.1
1,567,846	+		MIT1002_01423	0.32	+1.6
1,567,854	-		MIT1002_01423	0.33	-0.9
1,567,854	-		MIT1002_01423	0.33	+0.9
1,567,854	-		MIT1002_01423	0.33	-0.9
1,567,912	+		MIT1002_01423	0.46	-0.2
1,567,971	+		MIT1002_01423	0.58	-2.3
1,568,008	+		MIT1002_01423	0.66	+1.1
1,568,054	+		MIT1002_01423	0.76	-0.6
1,568,054	+		MIT1002_01423	0.76	+2.1