Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01420

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,563,825	+		MIT1002_01419	0.34	-0.5
1,563,860	-		MIT1002_01419	0.37	-0.9
1,563,868	+		MIT1002_01419	0.38	-1.0
1,563,989	+		MIT1002_01419	0.49	+0.8
1,564,093	+		MIT1002_01419	0.59	-0.4
1,564,116	+		MIT1002_01419	0.62	-1.1
1,564,127	+		MIT1002_01419	0.63	-1.9
1,564,127	+		MIT1002_01419	0.63	-0.7
1,564,127	+		MIT1002_01419	0.63	-0.7
1,564,135	-		MIT1002_01419	0.63	+0.0
1,564,151	-		MIT1002_01419	0.65	-2.2
1,564,159	+		MIT1002_01419	0.66	-0.3
1,564,161	-		MIT1002_01419	0.66	-0.8
1,564,276	+		MIT1002_01419	0.77	-1.1
1,564,281	+		MIT1002_01419	0.77	-1.8
1,564,323	+		MIT1002_01419	0.81	+1.3
1,564,396	+		MIT1002_01419	0.88	+0.0
1,564,449	-				-1.1
1,564,449	-				-0.4
1,564,484	+				-0.1
1,564,495	+				-0.1
1,564,495	+				-1.7
1,564,548	-				+2.0
1,564,667	+				-0.6
1,564,667	-				-0.2
1,564,693	-				-0.2
1,564,702	+				+1.4
1,564,774	+				-0.5
1,564,856	+				+1.0
1,564,934	-		MIT1002_01420	0.11	-1.6
1,564,971	-		MIT1002_01420	0.13	-3.6
1,564,992	+		MIT1002_01420	0.15	-2.0
1,565,073	+		MIT1002_01420	0.21	-1.6
1,565,081	-		MIT1002_01420	0.22	-2.4
1,565,081	-		MIT1002_01420	0.22	-1.2
1,565,115	-		MIT1002_01420	0.24	-3.2
1,565,124	-		MIT1002_01420	0.25	-1.9
1,565,176	+		MIT1002_01420	0.29	-0.8
1,565,176	+		MIT1002_01420	0.29	-4.8
1,565,176	+		MIT1002_01420	0.29	-1.1
1,565,178	-		MIT1002_01420	0.29	-2.9
1,565,472	+		MIT1002_01420	0.51	-1.8
1,565,554	-		MIT1002_01420	0.57	-1.1
1,565,582	+		MIT1002_01420	0.59	-1.8
1,565,582	+		MIT1002_01420	0.59	-2.4
1,565,584	+		MIT1002_01420	0.59	-1.7
1,565,584	+		MIT1002_01420	0.59	+0.2
1,565,590	-		MIT1002_01420	0.60	-0.7
1,565,590	-		MIT1002_01420	0.60	-4.3
1,565,592	-		MIT1002_01420	0.60	-1.0
1,565,619	+		MIT1002_01420	0.62	-1.9
1,565,683	+		MIT1002_01420	0.67	-3.0
1,565,792	+		MIT1002_01420	0.75	+1.3
1,565,792	+		MIT1002_01420	0.75	+1.0
1,566,000	+				-3.9
1,566,025	+				-2.9
1,566,025	+				-1.1
1,566,033	-				-2.2
1,566,171	+				-0.7
1,566,310	+		MIT1002_01421	0.28	-0.5
1,566,328	-		MIT1002_01421	0.31	-0.0
1,566,363	-		MIT1002_01421	0.36	+1.0
1,566,395	-		MIT1002_01421	0.40	-0.4
1,566,492	+		MIT1002_01421	0.55	-0.7
1,566,500	-		MIT1002_01421	0.56	+0.1
1,566,502	+		MIT1002_01421	0.56	+3.0
1,566,541	-		MIT1002_01421	0.62	+0.5
1,566,613	+		MIT1002_01421	0.73	-0.1
1,566,666	-		MIT1002_01421	0.81	-0.2
1,566,682	+		MIT1002_01421	0.83	+1.0
1,566,713	+		MIT1002_01421	0.88	-0.7
1,566,721	-		MIT1002_01421	0.89	+1.3
1,566,796	+				+0.0
1,566,930	+		MIT1002_01422	0.49	-1.6
1,566,996	+		MIT1002_01422	0.73	-5.7
1,567,012	+		MIT1002_01422	0.79	-4.2
1,567,012	+		MIT1002_01422	0.79	-2.5
1,567,012	+		MIT1002_01422	0.79	-5.1
1,567,110	-				-0.2
1,567,120	-				+1.1