Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01400

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,548,855	-		MIT1002_01397	0.68	-0.8
1,548,892	-		MIT1002_01397	0.70	-2.2
1,548,923	-		MIT1002_01397	0.72	+0.7
1,549,012	-		MIT1002_01397	0.78	+0.1
1,549,064	-		MIT1002_01397	0.81	-0.6
1,549,087	-		MIT1002_01397	0.83	+0.8
1,549,124	-		MIT1002_01397	0.85	-0.4
1,549,228	+				+0.4
1,549,236	-				+0.7
1,549,236	-				+1.2
1,549,306	-				-0.0
1,549,390	+				+0.7
1,549,422	+				+1.2
1,549,433	-				-0.7
1,549,445	+				-0.1
1,549,466	+				-1.7
1,549,526	+				-0.6
1,549,545	+				+0.9
1,549,634	-		MIT1002_01398	0.22	+1.0
1,549,718	-				-0.3
1,549,721	+				+1.1
1,549,754	-		MIT1002_01399	0.32	+1.0
1,550,146	+				-0.9
1,550,252	-				-1.2
1,550,266	-				+1.1
1,550,361	+				+2.3
1,550,369	-				+1.1
1,550,473	-				-0.1
1,550,473	-				+1.0
1,550,538	+				-2.2
1,550,538	+				-0.3
1,550,600	-				+1.3
1,550,603	+				+0.8
1,550,603	+				-0.2
1,550,611	-				-2.0
1,550,695	-				+0.7
1,550,711	-				+0.1
1,550,794	+				-0.0
1,550,818	+				-0.5
1,550,818	+				+1.4
1,550,818	+				-0.2
1,550,819	+				+1.5
1,550,826	-				-2.1
1,550,862	-				+3.3