Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01352

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,494,801	-		MIT1002_01350	0.86	-0.0
1,494,803	+		MIT1002_01350	0.86	+0.4
1,494,816	+		MIT1002_01350	0.87	+0.2
1,494,822	-		MIT1002_01350	0.87	-1.2
1,494,822	-		MIT1002_01350	0.87	+0.5
1,494,822	-		MIT1002_01350	0.87	+0.5
1,494,891	+		MIT1002_01350	0.90	+0.4
1,495,060	+				+1.5
1,495,115	-				-3.3
1,495,127	+				-0.2
1,495,150	+				+0.4
1,495,160	+				-0.2
1,495,268	+				-1.3
1,495,442	+		MIT1002_01351	0.33	-1.2
1,495,450	-		MIT1002_01351	0.36	-0.2
1,495,457	+		MIT1002_01351	0.38	-0.5
1,495,542	+		MIT1002_01351	0.61	-1.7
1,495,574	+		MIT1002_01351	0.70	-0.1
1,495,652	-				+0.9
1,495,662	+				-0.8
1,495,829	-				-2.3
1,495,829	-				-1.7
1,495,852	+				-2.6
1,495,892	+				-2.3
1,495,930	+		MIT1002_01352	0.12	-0.6
1,495,930	+		MIT1002_01352	0.12	-1.2
1,495,930	+		MIT1002_01352	0.12	-1.0
1,495,930	+		MIT1002_01352	0.12	-2.5
1,495,931	-		MIT1002_01352	0.12	-2.8
1,495,931	-		MIT1002_01352	0.12	-3.7
1,495,938	-		MIT1002_01352	0.12	+0.0
1,495,938	-		MIT1002_01352	0.12	+0.2
1,495,938	-		MIT1002_01352	0.12	-1.2
1,495,938	-		MIT1002_01352	0.12	+2.0
1,495,938	-		MIT1002_01352	0.12	-2.1
1,495,938	-		MIT1002_01352	0.12	+0.0
1,495,938	-		MIT1002_01352	0.12	+0.2
1,495,938	-		MIT1002_01352	0.12	-1.8
1,495,938	-		MIT1002_01352	0.12	-1.0
1,495,940	+		MIT1002_01352	0.12	-1.9
1,495,960	+		MIT1002_01352	0.14	-0.2
1,496,003	+		MIT1002_01352	0.18	-1.2
1,496,087	+		MIT1002_01352	0.26	-2.6
1,496,087	+		MIT1002_01352	0.26	-0.7
1,496,117	+		MIT1002_01352	0.28	-3.5
1,496,122	-		MIT1002_01352	0.29	-1.4
1,496,145	+		MIT1002_01352	0.31	-2.7
1,496,199	+		MIT1002_01352	0.35	-2.3
1,496,199	+		MIT1002_01352	0.35	-2.1
1,496,207	-		MIT1002_01352	0.36	-0.8
1,496,257	+		MIT1002_01352	0.41	-1.6
1,496,265	-		MIT1002_01352	0.41	+0.0
1,496,267	+		MIT1002_01352	0.42	-2.8
1,496,280	-		MIT1002_01352	0.43	-2.4
1,496,284	-		MIT1002_01352	0.43	-3.9
1,496,398	+		MIT1002_01352	0.53	-2.6
1,496,398	+		MIT1002_01352	0.53	-1.5
1,496,401	-		MIT1002_01352	0.53	-0.6
1,496,458	+		MIT1002_01352	0.58	-1.7
1,496,486	-		MIT1002_01352	0.61	-2.8
1,496,522	-		MIT1002_01352	0.64	-1.3
1,496,626	+		MIT1002_01352	0.73	+0.1
1,496,719	+		MIT1002_01352	0.82	-1.4
1,496,799	-		MIT1002_01352	0.89	-2.3
1,496,824	+				+0.5
1,496,832	-				-2.5
1,496,873	-				+0.1
1,496,873	-				-1.1
1,496,957	+				-2.0
1,496,957	+				-1.5
1,496,965	-				-0.1
1,497,038	+				+0.0
1,497,070	+				-1.9
1,497,111	+				-2.3
1,497,119	-				+0.7
1,497,119	-				-0.9
1,497,119	-				+1.0
1,497,136	-				-1.8
1,497,160	+				-0.4
1,497,231	+				-1.5
1,497,236	+				+1.8
1,497,238	+				-0.4
1,497,246	-				+0.6
1,497,269	-				-0.1
1,497,290	-				-0.3
1,497,320	-				-0.2
1,497,408	+				+1.3
1,497,421	-				+1.2
1,497,539	-		MIT1002_01353	0.23	-1.9
1,497,569	-		MIT1002_01353	0.28	+2.6
1,497,584	-		MIT1002_01353	0.31	+1.1
1,497,586	+		MIT1002_01353	0.31	+0.1
1,497,590	+		MIT1002_01353	0.32	+0.8
1,497,614	+		MIT1002_01353	0.36	-1.1
1,497,637	+		MIT1002_01353	0.40	+0.7
1,497,671	-		MIT1002_01353	0.46	-1.1
1,497,671	-		MIT1002_01353	0.46	-0.1
1,497,678	-		MIT1002_01353	0.48	-2.1
1,497,705	+		MIT1002_01353	0.52	-0.2
1,497,714	-		MIT1002_01353	0.54	+1.9
1,497,725	+		MIT1002_01353	0.56	-1.3
1,497,827	+		MIT1002_01353	0.74	-0.8
1,497,841	+		MIT1002_01353	0.76	+0.1
1,497,859	-		MIT1002_01353	0.80	-0.2