Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01316

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,462,017	+				-0.6
1,462,164	-				+0.3
1,462,176	+				+0.5
1,462,221	+		MIT1002_01316	0.10	+1.3
1,462,244	+		MIT1002_01316	0.12	+0.5
1,462,410	+		MIT1002_01316	0.25	-0.7
1,462,418	-		MIT1002_01316	0.26	+1.0
1,462,418	-		MIT1002_01316	0.26	+0.2
1,462,482	+		MIT1002_01316	0.31	-2.0
1,462,490	-		MIT1002_01316	0.32	-1.6
1,462,490	-		MIT1002_01316	0.32	-4.4
1,462,546	-		MIT1002_01316	0.36	-1.9
1,462,548	+		MIT1002_01316	0.36	-1.8
1,462,582	-		MIT1002_01316	0.39	+0.8
1,462,611	-		MIT1002_01316	0.41	+0.3
1,462,648	-		MIT1002_01316	0.44	+1.3
1,462,684	-		MIT1002_01316	0.47	-1.2
1,462,696	+		MIT1002_01316	0.48	-2.8
1,462,715	+		MIT1002_01316	0.50	-0.7
1,462,723	-		MIT1002_01316	0.50	-1.6
1,462,762	+		MIT1002_01316	0.53	-2.1
1,462,800	+		MIT1002_01316	0.56	-0.9
1,462,804	+		MIT1002_01316	0.57	-0.8
1,462,839	-		MIT1002_01316	0.59	-4.6
1,462,938	-		MIT1002_01316	0.67	-1.4
1,462,971	-		MIT1002_01316	0.70	+1.0
1,462,977	-		MIT1002_01316	0.70	-2.8
1,462,981	+		MIT1002_01316	0.71	-2.3
1,462,985	+		MIT1002_01316	0.71	-3.5
1,463,016	+		MIT1002_01316	0.74	+0.3
1,463,060	+		MIT1002_01316	0.77	-0.2
1,463,078	-		MIT1002_01316	0.79	-2.2
1,463,091	-		MIT1002_01316	0.80	-1.5
1,463,091	-		MIT1002_01316	0.80	-1.2
1,463,149	+		MIT1002_01316	0.84	+0.2
1,463,224	+				-2.4
1,463,224	+				+0.3
1,463,224	+				-0.4
1,463,244	+				-1.8
1,463,244	+				-1.6
1,463,252	-				-1.9
1,463,264	-				-2.6
1,463,448	-				-4.1
1,463,699	+				-1.2
1,463,707	-				+0.1
1,463,707	-				-1.9
1,463,718	+		MIT1002_01317	0.11	-1.0
1,463,736	-		MIT1002_01317	0.13	+0.7
1,463,742	+		MIT1002_01317	0.14	-0.9
1,463,754	-		MIT1002_01317	0.15	-0.7
1,463,754	-		MIT1002_01317	0.15	+1.5
1,463,754	-		MIT1002_01317	0.15	+1.0
1,463,890	-		MIT1002_01317	0.32	+0.4
1,463,908	-		MIT1002_01317	0.35	+0.5
1,463,929	-		MIT1002_01317	0.37	+1.0
1,463,934	-		MIT1002_01317	0.38	-2.1
1,463,967	+		MIT1002_01317	0.42	+0.4
1,463,981	+		MIT1002_01317	0.44	+2.6
1,464,133	-		MIT1002_01317	0.63	+1.0
1,464,220	+		MIT1002_01317	0.74	+2.9
1,464,220	+		MIT1002_01317	0.74	-0.7
1,464,238	-		MIT1002_01317	0.76	+0.3
1,464,265	+		MIT1002_01317	0.79	-1.3
1,464,265	+		MIT1002_01317	0.79	-0.4
1,464,265	+		MIT1002_01317	0.79	-0.1
1,464,265	+		MIT1002_01317	0.79	-0.5
1,464,265	+		MIT1002_01317	0.79	-0.1
1,464,265	+		MIT1002_01317	0.79	+1.9
1,464,265	+		MIT1002_01317	0.79	-1.0
1,464,265	+		MIT1002_01317	0.79	-2.1
1,464,265	+		MIT1002_01317	0.79	+0.8
1,464,273	-		MIT1002_01317	0.80	-0.2
1,464,273	-		MIT1002_01317	0.80	-0.5
1,464,273	-		MIT1002_01317	0.80	+0.6
1,464,273	-		MIT1002_01317	0.80	+1.2
1,464,273	-		MIT1002_01317	0.80	+1.1
1,464,315	-		MIT1002_01317	0.86	-2.8
1,464,316	-		MIT1002_01317	0.86	+1.2
1,464,317	-		MIT1002_01317	0.86	+0.4