Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01265

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,391,652	-		MIT1002_01263	0.86	+0.1
1,391,691	-				-2.6
1,391,691	-				-2.3
1,391,699	-				-1.6
1,391,701	+				-0.8
1,391,709	-				-1.6
1,391,719	+				-0.6
1,391,812	-				-0.2
1,391,864	+				-1.6
1,391,864	+				-1.0
1,391,879	+				-0.4
1,391,879	+				-1.7
1,391,887	-				-2.0
1,391,887	-				+0.1
1,391,904	-				-2.7
1,391,918	-		MIT1002_01264	0.12	-1.1
1,391,927	+		MIT1002_01264	0.13	-3.8
1,391,934	+		MIT1002_01264	0.14	-0.5
1,391,935	-		MIT1002_01264	0.14	-2.8
1,391,942	-		MIT1002_01264	0.15	-1.5
1,391,953	-		MIT1002_01264	0.17	-1.6
1,391,959	-		MIT1002_01264	0.18	+0.1
1,392,108	-		MIT1002_01264	0.40	-1.4
1,392,147	+		MIT1002_01264	0.46	-1.5
1,392,234	-		MIT1002_01264	0.59	-1.0
1,392,271	+		MIT1002_01264	0.64	-3.0
1,392,320	+		MIT1002_01264	0.71	-0.9
1,392,370	-		MIT1002_01264	0.79	-1.8
1,392,430	+		MIT1002_01264	0.88	-2.2
1,392,596	+				-2.4
1,392,596	+				-2.8
1,392,596	+				+0.8
1,392,604	-				-0.1
1,392,604	-				-5.9
1,392,671	-				-2.1
1,392,686	+		MIT1002_01265	0.11	-4.9
1,392,705	-		MIT1002_01265	0.13	-1.1
1,392,744	+		MIT1002_01265	0.17	-2.4
1,392,849	+		MIT1002_01265	0.29	-3.1
1,392,849	+		MIT1002_01265	0.29	-1.3
1,392,864	+		MIT1002_01265	0.31	-0.2
1,392,867	-		MIT1002_01265	0.31	-1.9
1,392,872	+		MIT1002_01265	0.32	-2.6
1,392,872	-		MIT1002_01265	0.32	-4.5
1,393,010	+		MIT1002_01265	0.47	-2.4
1,393,067	+		MIT1002_01265	0.53	-3.0
1,393,075	-		MIT1002_01265	0.54	-1.2
1,393,075	-		MIT1002_01265	0.54	-2.2
1,393,092	-		MIT1002_01265	0.56	-2.9
1,393,102	+		MIT1002_01265	0.57	-2.9
1,393,130	-		MIT1002_01265	0.60	-2.2
1,393,158	+		MIT1002_01265	0.63	-0.5
1,393,168	+		MIT1002_01265	0.65	-0.1
1,393,176	-		MIT1002_01265	0.65	-3.4
1,393,224	+		MIT1002_01265	0.71	-1.8
1,393,232	-		MIT1002_01265	0.72	-2.3
1,393,232	-		MIT1002_01265	0.72	+1.4
1,393,232	-		MIT1002_01265	0.72	-1.2
1,393,232	-		MIT1002_01265	0.72	-1.7
1,393,232	-		MIT1002_01265	0.72	-1.9
1,393,232	-		MIT1002_01265	0.72	-3.1
1,393,238	-		MIT1002_01265	0.72	-1.6
1,393,264	+		MIT1002_01265	0.75	-2.8
1,393,294	+		MIT1002_01265	0.79	-1.2
1,393,302	-		MIT1002_01265	0.79	+0.8
1,393,302	-		MIT1002_01265	0.79	-2.0
1,393,359	-		MIT1002_01265	0.86	-2.7
1,393,373	+		MIT1002_01265	0.87	+0.2
1,393,381	-		MIT1002_01265	0.88	-1.4
1,393,625	-				-2.7
1,393,645	+				-5.6
1,393,736	-		MIT1002_01266	0.11	-3.1
1,393,845	+		MIT1002_01266	0.17	-5.4
1,394,035	-		MIT1002_01266	0.29	-2.2
1,394,035	-		MIT1002_01266	0.29	+1.1
1,394,043	-		MIT1002_01266	0.29	-1.2
1,394,377	+		MIT1002_01266	0.49	-5.5
1,394,384	+		MIT1002_01266	0.50	-2.1
1,394,385	-		MIT1002_01266	0.50	-0.6
1,394,385	-		MIT1002_01266	0.50	-3.0
1,394,385	-		MIT1002_01266	0.50	+0.8
1,394,385	-		MIT1002_01266	0.50	-2.7
1,394,408	+		MIT1002_01266	0.51	-1.5
1,394,408	+		MIT1002_01266	0.51	-2.1
1,394,416	-		MIT1002_01266	0.52	+0.4
1,394,416	-		MIT1002_01266	0.52	-4.1
1,394,431	-		MIT1002_01266	0.52	-1.4
1,394,475	+		MIT1002_01266	0.55	-1.7
1,394,483	-		MIT1002_01266	0.56	-0.9