Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01263

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,390,115	-				+2.2
1,390,115	-				-0.2
1,390,117	+				-0.7
1,390,125	-				-1.3
1,390,125	-				+1.4
1,390,125	-				-1.3
1,390,131	+				+0.7
1,390,244	+		MIT1002_01262	0.20	-0.4
1,390,347	+		MIT1002_01262	0.31	-0.7
1,390,355	-		MIT1002_01262	0.31	+1.0
1,390,362	-		MIT1002_01262	0.32	+0.7
1,390,364	+		MIT1002_01262	0.32	+4.4
1,390,512	+		MIT1002_01262	0.48	-0.2
1,390,515	-		MIT1002_01262	0.49	-0.2
1,390,520	-		MIT1002_01262	0.49	+1.0
1,390,525	+		MIT1002_01262	0.50	+0.1
1,390,550	-		MIT1002_01262	0.53	+0.7
1,390,847	+		MIT1002_01262	0.85	-1.6
1,390,929	-				+1.9
1,390,933	+				-0.5
1,390,940	-				+0.8
1,390,962	-				+1.1
1,391,056	-				+0.3
1,391,397	+		MIT1002_01263	0.47	-1.8
1,391,397	+		MIT1002_01263	0.47	-3.5
1,391,397	+		MIT1002_01263	0.47	-5.0
1,391,466	+		MIT1002_01263	0.58	-4.6
1,391,486	-		MIT1002_01263	0.61	+0.8
1,391,523	-		MIT1002_01263	0.67	+0.4
1,391,528	-		MIT1002_01263	0.67	-3.0
1,391,652	-		MIT1002_01263	0.86	+0.1
1,391,691	-				-2.6
1,391,691	-				-2.3
1,391,699	-				-1.6
1,391,701	+				-0.8
1,391,709	-				-1.6
1,391,719	+				-0.6
1,391,812	-				-0.2
1,391,864	+				-1.6
1,391,864	+				-1.0
1,391,879	+				-0.4
1,391,879	+				-1.7
1,391,887	-				-2.0
1,391,887	-				+0.1
1,391,904	-				-2.7
1,391,918	-		MIT1002_01264	0.12	-1.1
1,391,927	+		MIT1002_01264	0.13	-3.8
1,391,934	+		MIT1002_01264	0.14	-0.5
1,391,935	-		MIT1002_01264	0.14	-2.8
1,391,942	-		MIT1002_01264	0.15	-1.5
1,391,953	-		MIT1002_01264	0.17	-1.6
1,391,959	-		MIT1002_01264	0.18	+0.1
1,392,108	-		MIT1002_01264	0.40	-1.4
1,392,147	+		MIT1002_01264	0.46	-1.5
1,392,234	-		MIT1002_01264	0.59	-1.0
1,392,271	+		MIT1002_01264	0.64	-3.0
1,392,320	+		MIT1002_01264	0.71	-0.9
1,392,370	-		MIT1002_01264	0.79	-1.8
1,392,430	+		MIT1002_01264	0.88	-2.2
1,392,596	+				-2.4
1,392,596	+				-2.8
1,392,596	+				+0.8
1,392,604	-				-0.1
1,392,604	-				-5.9
1,392,671	-				-2.1
1,392,686	+		MIT1002_01265	0.11	-4.9
1,392,705	-		MIT1002_01265	0.13	-1.1