Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01160

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,274,775	+		MIT1002_01158	0.51	-0.9
1,274,830	+		MIT1002_01158	0.56	+0.9
1,274,858	-		MIT1002_01158	0.59	+2.2
1,274,883	-		MIT1002_01158	0.61	+0.4
1,274,924	-		MIT1002_01158	0.64	-0.8
1,274,960	-		MIT1002_01158	0.68	+0.5
1,275,018	+		MIT1002_01158	0.73	+0.4
1,275,044	+		MIT1002_01158	0.75	-0.3
1,275,079	-		MIT1002_01158	0.78	-1.3
1,275,081	+		MIT1002_01158	0.78	-0.8
1,275,208	-		MIT1002_01158	0.90	-2.3
1,275,220	+				+2.4
1,275,254	-				-1.1
1,275,305	+				-0.5
1,275,407	+		MIT1002_01159	0.20	-0.6
1,275,415	-		MIT1002_01159	0.23	-0.4
1,275,488	+		MIT1002_01159	0.49	-0.2
1,275,494	-		MIT1002_01159	0.51	-1.1
1,275,534	+		MIT1002_01159	0.65	+0.2
1,275,646	+				-1.4
1,275,646	+				+0.3
1,275,708	+				-0.6
1,275,708	+				+0.6
1,275,755	-		MIT1002_01160	0.12	-0.7
1,275,770	+		MIT1002_01160	0.14	+0.6
1,275,807	-		MIT1002_01160	0.17	-1.2
1,275,842	-		MIT1002_01160	0.21	+0.1
1,275,935	-		MIT1002_01160	0.30	-1.9
1,275,968	+		MIT1002_01160	0.33	-0.4
1,276,028	+		MIT1002_01160	0.39	+1.4
1,276,028	+		MIT1002_01160	0.39	-0.4
1,276,050	+		MIT1002_01160	0.41	+0.5
1,276,050	+		MIT1002_01160	0.41	+0.8
1,276,075	+		MIT1002_01160	0.44	-2.2
1,276,150	-		MIT1002_01160	0.51	-2.0
1,276,168	+		MIT1002_01160	0.53	-1.9
1,276,176	-		MIT1002_01160	0.54	+2.4
1,276,183	+		MIT1002_01160	0.54	+1.8
1,276,191	+		MIT1002_01160	0.55	+1.1
1,276,198	+		MIT1002_01160	0.56	-2.3
1,276,251	+		MIT1002_01160	0.61	+0.0
1,276,309	-		MIT1002_01160	0.67	-0.5
1,276,311	-		MIT1002_01160	0.67	-0.6
1,276,315	+		MIT1002_01160	0.67	-0.5
1,276,316	-		MIT1002_01160	0.67	-0.6
1,276,340	+		MIT1002_01160	0.70	+0.9
1,276,358	+		MIT1002_01160	0.72	+0.6
1,276,363	+		MIT1002_01160	0.72	-1.9
1,276,371	-		MIT1002_01160	0.73	-0.6
1,276,594	+				+0.6
1,276,594	-				+0.5
1,276,611	-				-0.8
1,276,652	+				-1.2
1,276,660	+				-1.0
1,276,660	+				-0.5
1,276,668	-				+0.2
1,276,670	-				+0.2
1,276,670	-				-1.3
1,276,681	-				+0.3
1,276,681	-				-0.1
1,276,681	-				-0.7
1,276,728	+				-0.6
1,276,737	-				-0.6
1,276,764	+				-1.2
1,276,784	+				-0.4
1,276,786	+				+0.6
1,276,869	+		MIT1002_01161	0.12	-0.0
1,276,887	-		MIT1002_01161	0.13	+0.9
1,276,887	-		MIT1002_01161	0.13	-0.3
1,276,914	+		MIT1002_01161	0.15	-0.5
1,276,914	+		MIT1002_01161	0.15	+0.9
1,276,914	+		MIT1002_01161	0.15	+0.7
1,276,914	+		MIT1002_01161	0.15	-0.1
1,276,914	+		MIT1002_01161	0.15	-0.6
1,276,922	-		MIT1002_01161	0.15	-0.6
1,276,922	-		MIT1002_01161	0.15	-1.1
1,276,922	-		MIT1002_01161	0.15	-1.5
1,276,922	-		MIT1002_01161	0.15	+0.3
1,276,922	-		MIT1002_01161	0.15	+1.4
1,276,922	-		MIT1002_01161	0.15	+0.8
1,276,922	-		MIT1002_01161	0.15	+0.1
1,276,922	-		MIT1002_01161	0.15	+0.4
1,276,979	-		MIT1002_01161	0.18	-1.3
1,276,979	-		MIT1002_01161	0.18	-0.3
1,277,015	+		MIT1002_01161	0.20	+1.4
1,277,015	+		MIT1002_01161	0.20	-1.2
1,277,016	+		MIT1002_01161	0.20	-1.4
1,277,023	-		MIT1002_01161	0.21	+0.8
1,277,023	-		MIT1002_01161	0.21	+0.6
1,277,054	-		MIT1002_01161	0.22	-2.2
1,277,098	+		MIT1002_01161	0.25	+0.3
1,277,115	+		MIT1002_01161	0.26	-0.7
1,277,179	-		MIT1002_01161	0.29	+1.4
1,277,197	+		MIT1002_01161	0.30	+0.6
1,277,209	+		MIT1002_01161	0.31	-1.9
1,277,217	+		MIT1002_01161	0.32	-0.6
1,277,218	+		MIT1002_01161	0.32	-1.3
1,277,218	+		MIT1002_01161	0.32	+0.3
1,277,218	+		MIT1002_01161	0.32	-0.2
1,277,225	-		MIT1002_01161	0.32	+0.7
1,277,226	-		MIT1002_01161	0.32	-0.4
1,277,243	+		MIT1002_01161	0.33	+0.7
1,277,262	-		MIT1002_01161	0.34	+1.4
1,277,262	-		MIT1002_01161	0.34	-0.7
1,277,289	+		MIT1002_01161	0.36	-1.6
1,277,289	+		MIT1002_01161	0.36	-1.0
1,277,289	+		MIT1002_01161	0.36	+0.6
1,277,292	-		MIT1002_01161	0.36	+0.2
1,277,297	-		MIT1002_01161	0.36	-0.9
1,277,297	-		MIT1002_01161	0.36	+0.2
1,277,297	-		MIT1002_01161	0.36	-1.0
1,277,297	-		MIT1002_01161	0.36	-1.5
1,277,297	-		MIT1002_01161	0.36	+0.6
1,277,322	+		MIT1002_01161	0.37	-0.0
1,277,322	+		MIT1002_01161	0.37	+0.6
1,277,322	+		MIT1002_01161	0.37	+1.1
1,277,330	-		MIT1002_01161	0.38	-0.1
1,277,341	-		MIT1002_01161	0.39	-0.6
1,277,355	-		MIT1002_01161	0.39	-0.6
1,277,377	-		MIT1002_01161	0.41	-2.3
1,277,379	+		MIT1002_01161	0.41	-1.0
1,277,495	+		MIT1002_01161	0.47	-1.0
1,277,518	+		MIT1002_01161	0.48	-0.4
1,277,545	+		MIT1002_01161	0.50	+1.8
1,277,545	+		MIT1002_01161	0.50	-0.7
1,277,548	-		MIT1002_01161	0.50	+1.0
1,277,555	+		MIT1002_01161	0.51	-0.7
1,277,584	+		MIT1002_01161	0.52	-1.7
1,277,584	+		MIT1002_01161	0.52	-1.1