Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00997

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
1,103,724	+		MIT1002_00996	0.31	+0.8
1,103,724	-		MIT1002_00996	0.31	-1.2
1,103,724	-		MIT1002_00996	0.31	-1.1
1,103,729	-		MIT1002_00996	0.32	-1.9
1,103,853	-		MIT1002_00996	0.44	+1.5
1,103,858	-		MIT1002_00996	0.44	+1.2
1,103,882	+		MIT1002_00996	0.46	+0.3
1,103,908	+		MIT1002_00996	0.49	-0.3
1,103,908	+		MIT1002_00996	0.49	-0.0
1,103,916	-		MIT1002_00996	0.50	-1.4
1,103,916	-		MIT1002_00996	0.50	-0.7
1,103,928	-		MIT1002_00996	0.51	+1.1
1,104,022	+		MIT1002_00996	0.60	-0.0
1,104,022	+		MIT1002_00996	0.60	-1.1
1,104,030	-		MIT1002_00996	0.60	+1.4
1,104,045	+		MIT1002_00996	0.62	+0.6
1,104,059	-		MIT1002_00996	0.63	+2.6
1,104,191	+		MIT1002_00996	0.76	+0.6
1,104,198	-		MIT1002_00996	0.76	-0.1
1,104,198	-		MIT1002_00996	0.76	+1.3
1,104,198	-		MIT1002_00996	0.76	+0.6
1,104,295	-		MIT1002_00996	0.86	-2.7
1,104,304	-		MIT1002_00996	0.86	-2.0
1,104,305	-		MIT1002_00996	0.87	+2.6
1,104,307	+		MIT1002_00996	0.87	+0.8
1,104,355	+				+0.1
1,104,363	-				+0.2
1,104,424	+				+0.2
1,104,582	+				-0.7
1,104,590	-				-0.3
1,104,604	+				+0.9
1,104,612	-				+1.0
1,104,612	-				-0.7
1,104,893	+		MIT1002_00997	0.69	-2.3
1,105,012	+				-0.7
1,105,017	+				+1.3
1,105,017	+				-1.2
1,105,025	-				-0.4
1,105,108	-		MIT1002_00998	0.11	+1.1
1,105,122	+		MIT1002_00998	0.13	+0.7
1,105,134	+		MIT1002_00998	0.14	-0.4
1,105,135	-		MIT1002_00998	0.14	-0.7
1,105,168	+		MIT1002_00998	0.19	-0.0
1,105,176	+		MIT1002_00998	0.19	-1.0
1,105,181	-		MIT1002_00998	0.20	-0.2
1,105,218	+		MIT1002_00998	0.25	-2.3
1,105,218	+		MIT1002_00998	0.25	-0.8
1,105,225	+		MIT1002_00998	0.25	+0.3
1,105,226	-		MIT1002_00998	0.26	-2.6
1,105,250	+		MIT1002_00998	0.29	-0.8
1,105,250	+		MIT1002_00998	0.29	+0.3
1,105,250	+		MIT1002_00998	0.29	+0.0
1,105,250	+		MIT1002_00998	0.29	+1.7
1,105,250	-		MIT1002_00998	0.29	-0.5
1,105,282	+		MIT1002_00998	0.32	+2.2
1,105,395	-		MIT1002_00998	0.46	+0.5
1,105,404	+		MIT1002_00998	0.47	+1.0
1,105,404	+		MIT1002_00998	0.47	+0.2
1,105,404	+		MIT1002_00998	0.47	+0.3
1,105,407	-		MIT1002_00998	0.48	-0.7
1,105,428	-		MIT1002_00998	0.50	-0.6
1,105,531	-		MIT1002_00998	0.63	+0.9
1,105,531	-		MIT1002_00998	0.63	-1.0
1,105,556	+		MIT1002_00998	0.66	-0.1
1,105,556	+		MIT1002_00998	0.66	-1.9
1,105,590	-		MIT1002_00998	0.70	+1.7
1,105,710	+		MIT1002_00998	0.85	+1.2
1,105,929	+				+0.7
1,105,929	+				+1.5
1,105,954	-		MIT1002_00999	0.12	+0.2
1,105,959	-		MIT1002_00999	0.13	-1.1
1,105,975	+		MIT1002_00999	0.17	+1.2
1,105,985	-		MIT1002_00999	0.19	-1.1