Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00113

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6
121,506	-				+0.2
121,517	+				-0.2
121,577	-		MIT1002_00112	0.15	-0.9
121,577	-		MIT1002_00112	0.15	-0.2
121,601	+		MIT1002_00112	0.18	+0.3
121,613	+		MIT1002_00112	0.19	+0.6
121,613	+		MIT1002_00112	0.19	-0.0
121,661	-		MIT1002_00112	0.25	-0.2
121,749	-		MIT1002_00112	0.37	+1.5
121,781	-		MIT1002_00112	0.41	+0.4
121,791	+		MIT1002_00112	0.42	-0.0
121,792	-		MIT1002_00112	0.42	+1.5
121,792	-		MIT1002_00112	0.42	-0.7
121,792	-		MIT1002_00112	0.42	-0.2
121,895	-		MIT1002_00112	0.56	-1.1
121,900	-		MIT1002_00112	0.56	+0.0
121,952	-		MIT1002_00112	0.63	-0.9
122,095	+		MIT1002_00112	0.81	-0.3
122,105	+		MIT1002_00112	0.83	+1.9
122,127	+		MIT1002_00112	0.85	-1.4
122,149	+		MIT1002_00112	0.88	-3.7
122,151	+		MIT1002_00112	0.89	+1.5
122,151	+		MIT1002_00112	0.89	-1.7
122,151	+		MIT1002_00112	0.89	-0.3
122,151	+		MIT1002_00112	0.89	+1.7
122,151	+		MIT1002_00112	0.89	-0.4
122,151	+		MIT1002_00112	0.89	+0.7
122,158	+		MIT1002_00112	0.89	+0.3
122,159	-		MIT1002_00112	0.90	+0.7
122,159	-		MIT1002_00112	0.90	+1.5
122,159	-		MIT1002_00112	0.90	-2.6
122,179	-				-0.2
122,356	+		MIT1002_00113	0.23	-1.6
122,364	-		MIT1002_00113	0.24	-1.8
122,374	-		MIT1002_00113	0.26	-3.1
122,388	+		MIT1002_00113	0.29	-1.4
122,412	+		MIT1002_00113	0.34	-4.2
122,447	+		MIT1002_00113	0.42	-3.3
122,503	+		MIT1002_00113	0.54	-3.1
122,587	-		MIT1002_00113	0.71	-3.4
122,603	+		MIT1002_00113	0.75	-1.7
122,617	+		MIT1002_00113	0.78	-2.7
122,622	+		MIT1002_00113	0.79	-2.9
122,622	+		MIT1002_00113	0.79	-3.6
122,622	+		MIT1002_00113	0.79	-2.5
122,630	-		MIT1002_00113	0.80	-0.5
122,630	-		MIT1002_00113	0.80	-2.5
122,724	-				+2.0
122,762	-				+0.2
122,850	-				-1.3
122,857	+				-0.2
122,865	-				-1.6
122,903	+				+0.7
122,947	-				-0.6
122,988	+				-2.6
123,047	+				-1.2
123,214	+				+0.1
123,298	+		MIT1002_00114	0.18	-0.1
123,301	+		MIT1002_00114	0.18	+1.3
123,306	-		MIT1002_00114	0.19	+1.5
123,528	-		MIT1002_00114	0.46	+0.2