Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS36695 and QEN71_RS36700 are separated by 5 nucleotides QEN71_RS36700 and QEN71_RS36705 are separated by 280 nucleotides QEN71_RS36705 and QEN71_RS36710 overlap by 4 nucleotides
QEN71_RS36695: QEN71_RS36695 - HD domain-containing phosphohydrolase, at 1,615,515 to 1,616,987
_RS36695
QEN71_RS36700: QEN71_RS36700 - DUF2322 family protein, at 1,616,993 to 1,617,325
_RS36700
QEN71_RS36705: QEN71_RS36705 - RNA polymerase sigma factor, at 1,617,606 to 1,618,154
_RS36705
QEN71_RS36710: QEN71_RS36710 - anti-sigma factor, at 1,618,151 to 1,619,083
_RS36710
Position (kb) 1617
1618
1619 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1616.719 kb on - strand, within QEN71_RS36695 at 1617.171 kb on + strand, within QEN71_RS36700 at 1617.305 kb on + strand at 1617.305 kb on + strand at 1617.306 kb on - strand at 1617.306 kb on - strand at 1617.365 kb on + strand at 1617.365 kb on + strand at 1617.365 kb on + strand at 1617.370 kb on + strand at 1617.465 kb on + strand at 1617.465 kb on + strand at 1617.466 kb on - strand at 1617.466 kb on - strand at 1617.466 kb on - strand at 1617.482 kb on + strand at 1617.581 kb on + strand at 1617.589 kb on - strand at 1617.674 kb on + strand, within QEN71_RS36705 at 1617.674 kb on + strand, within QEN71_RS36705 at 1617.675 kb on - strand, within QEN71_RS36705 at 1617.675 kb on - strand, within QEN71_RS36705 at 1617.773 kb on + strand, within QEN71_RS36705 at 1617.773 kb on + strand, within QEN71_RS36705 at 1617.774 kb on - strand, within QEN71_RS36705 at 1618.005 kb on + strand, within QEN71_RS36705 at 1618.006 kb on - strand, within QEN71_RS36705 at 1618.181 kb on + strand at 1618.181 kb on + strand at 1618.181 kb on + strand at 1618.181 kb on + strand at 1618.181 kb on + strand at 1618.181 kb on + strand at 1618.181 kb on + strand at 1618.182 kb on - strand at 1618.547 kb on - strand, within QEN71_RS36710 at 1618.658 kb on + strand, within QEN71_RS36710 at 1618.659 kb on - strand, within QEN71_RS36710 at 1618.836 kb on - strand, within QEN71_RS36710 at 1618.836 kb on - strand, within QEN71_RS36710 at 1618.961 kb on + strand, within QEN71_RS36710 at 1618.961 kb on + strand, within QEN71_RS36710 at 1618.961 kb on + strand, within QEN71_RS36710 at 1618.961 kb on + strand, within QEN71_RS36710 at 1618.961 kb on + strand, within QEN71_RS36710 at 1618.961 kb on + strand, within QEN71_RS36710 at 1618.961 kb on + strand, within QEN71_RS36710 at 1618.961 kb on + strand, within QEN71_RS36710 at 1618.961 kb on + strand, within QEN71_RS36710 at 1618.961 kb on + strand, within QEN71_RS36710 at 1618.962 kb on - strand, within QEN71_RS36710 at 1618.962 kb on - strand, within QEN71_RS36710
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 1,616,719 - QEN71_RS36695 0.82 -1.7 1,617,171 + QEN71_RS36700 0.53 -0.8 1,617,305 + -0.8 1,617,305 + -0.6 1,617,306 - -0.9 1,617,306 - -0.9 1,617,365 + -0.4 1,617,365 + -1.3 1,617,365 + -0.9 1,617,370 + +1.9 1,617,465 + -0.6 1,617,465 + +1.1 1,617,466 - -2.9 1,617,466 - -2.3 1,617,466 - +0.9 1,617,482 + +0.6 1,617,581 + -1.1 1,617,589 - +1.2 1,617,674 + QEN71_RS36705 0.12 -0.6 1,617,674 + QEN71_RS36705 0.12 -1.0 1,617,675 - QEN71_RS36705 0.13 +1.0 1,617,675 - QEN71_RS36705 0.13 -0.7 1,617,773 + QEN71_RS36705 0.30 +1.2 1,617,773 + QEN71_RS36705 0.30 -1.9 1,617,774 - QEN71_RS36705 0.31 -1.5 1,618,005 + QEN71_RS36705 0.73 -1.1 1,618,006 - QEN71_RS36705 0.73 -0.8 1,618,181 + +1.1 1,618,181 + +0.2 1,618,181 + -1.8 1,618,181 + +0.3 1,618,181 + +1.2 1,618,181 + +0.0 1,618,181 + -0.4 1,618,182 - +0.2 1,618,547 - QEN71_RS36710 0.42 -0.3 1,618,658 + QEN71_RS36710 0.54 -0.2 1,618,659 - QEN71_RS36710 0.54 +0.6 1,618,836 - QEN71_RS36710 0.73 -0.4 1,618,836 - QEN71_RS36710 0.73 +0.1 1,618,961 + QEN71_RS36710 0.87 +0.3 1,618,961 + QEN71_RS36710 0.87 +0.5 1,618,961 + QEN71_RS36710 0.87 +0.1 1,618,961 + QEN71_RS36710 0.87 -0.2 1,618,961 + QEN71_RS36710 0.87 -0.2 1,618,961 + QEN71_RS36710 0.87 -1.0 1,618,961 + QEN71_RS36710 0.87 -0.3 1,618,961 + QEN71_RS36710 0.87 +1.4 1,618,961 + QEN71_RS36710 0.87 +0.6 1,618,961 + QEN71_RS36710 0.87 +0.4 1,618,962 - QEN71_RS36710 0.87 -0.3 1,618,962 - QEN71_RS36710 0.87 +1.1
Or see this region's nucleotide sequence