Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS28485

Experiment: LB_noSalt with Chloride 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB_noSalt with Chloride 200 mM
6,318,435	+		QEN71_RS28475	0.79	-0.5
6,318,435	+		QEN71_RS28475	0.79	-0.1
6,318,435	+		QEN71_RS28475	0.79	+0.8
6,318,435	+		QEN71_RS28475	0.79	-0.1
6,318,436	-		QEN71_RS28475	0.79	+1.6
6,318,436	-		QEN71_RS28475	0.79	-0.2
6,318,439	+		QEN71_RS28475	0.79	+1.5
6,318,439	+		QEN71_RS28475	0.79	-0.7
6,318,439	+		QEN71_RS28475	0.79	-0.9
6,318,439	+		QEN71_RS28475	0.79	+0.5
6,318,439	+		QEN71_RS28475	0.79	-0.3
6,318,439	+		QEN71_RS28475	0.79	-0.9
6,318,439	+		QEN71_RS28475	0.79	-0.1
6,318,440	-		QEN71_RS28475	0.79	+0.3
6,318,440	-		QEN71_RS28475	0.79	-0.3
6,318,440	-		QEN71_RS28475	0.79	+0.3
6,318,440	-		QEN71_RS28475	0.79	+0.2
6,318,440	-		QEN71_RS28475	0.79	-0.3
6,318,440	-		QEN71_RS28475	0.79	+0.9
6,318,440	-		QEN71_RS28475	0.79	+0.7
6,318,440	-		QEN71_RS28475	0.79	-0.2
6,318,440	-		QEN71_RS28475	0.79	+0.0
6,318,440	-		QEN71_RS28475	0.79	-0.1
6,318,440	-		QEN71_RS28475	0.79	-0.1
6,318,450	+		QEN71_RS28475	0.81	-2.2
6,318,450	+		QEN71_RS28475	0.81	+0.2
6,318,451	-		QEN71_RS28475	0.81	+0.3
6,318,451	-		QEN71_RS28475	0.81	+0.2
6,318,451	-		QEN71_RS28475	0.81	+0.3
6,318,558	+				-1.4
6,318,558	+				-0.3
6,318,558	+				-0.4
6,318,558	+				-0.6
6,318,558	+				-0.7
6,318,558	+				-1.8
6,318,558	+				-1.2
6,318,558	+				+0.6
6,318,558	+				-0.6
6,318,559	-				+0.0
6,318,559	-				+0.1
6,318,559	-				-3.5
6,318,559	-				-0.2
6,318,559	-				+0.6
6,318,559	-				+0.0
6,318,559	-				-1.1
6,318,559	-				-0.4
6,318,559	-				+1.5
6,318,559	-				+0.6
6,318,567	+				-0.4
6,318,568	-				-1.2
6,318,568	-				+0.4
6,318,587	-				-2.8
6,318,587	-				-1.8
6,318,648	+				+0.0
6,318,648	+				-0.5
6,318,648	+				+0.5
6,318,648	+				+0.9
6,318,648	+				-1.4
6,318,648	+				-0.6
6,318,648	+				-0.5
6,318,649	-				-0.5
6,318,649	-				-0.2
6,318,649	-				-1.0
6,318,649	-				+0.4
6,318,649	-				+0.0
6,318,700	+				-0.8
6,318,700	+				+0.0
6,318,701	-				-0.4
6,318,701	-				+0.9
6,318,701	-				-0.8
6,318,721	-				-0.1
6,318,862	+		QEN71_RS28480	0.32	+0.3
6,318,862	+		QEN71_RS28480	0.32	-1.0
6,318,862	+		QEN71_RS28480	0.32	-0.9
6,318,862	+		QEN71_RS28480	0.32	-0.0
6,318,862	+		QEN71_RS28480	0.32	+0.2
6,318,862	+		QEN71_RS28480	0.32	+2.3
6,318,862	+		QEN71_RS28480	0.32	-0.8
6,318,862	+		QEN71_RS28480	0.32	+0.5
6,318,862	+		QEN71_RS28480	0.32	-0.5
6,318,863	-		QEN71_RS28480	0.32	-0.3
6,318,863	-		QEN71_RS28480	0.32	-0.1
6,318,863	-		QEN71_RS28480	0.32	-0.8
6,318,863	-		QEN71_RS28480	0.32	-0.9
6,319,007	-		QEN71_RS28480	0.57	-1.5
6,319,102	+		QEN71_RS28480	0.73	-0.1
6,319,102	+		QEN71_RS28480	0.73	-1.2
6,319,102	+		QEN71_RS28480	0.73	-0.1
6,319,102	+		QEN71_RS28480	0.73	+0.7
6,319,102	+		QEN71_RS28480	0.73	-0.0
6,319,102	+		QEN71_RS28480	0.73	+0.5
6,319,103	-		QEN71_RS28480	0.74	-0.5
6,319,103	-		QEN71_RS28480	0.74	-0.3
6,319,103	-		QEN71_RS28480	0.74	-0.9
6,319,252	+				-0.5
6,319,252	+				-0.4
6,319,252	+				-0.4
6,319,252	+				+0.0
6,319,252	+				+0.3
6,319,252	+				-0.1
6,319,253	-				-0.9
6,319,253	-				+0.6
6,319,357	+				+0.3
6,319,357	+				+1.8
6,319,358	-				+0.9
6,319,362	+				-0.7
6,319,362	+				-0.4
6,319,362	+				-0.4
6,319,362	+				-0.1
6,319,362	+				-1.2
6,319,363	-				-0.2
6,319,363	-				+0.1
6,319,363	-				-0.7
6,319,402	+				+0.3
6,319,402	+				+0.7
6,319,403	-				-0.5
6,319,482	+				+0.1
6,319,482	+				-0.1
6,319,483	-				-0.1
6,319,483	-				-0.5
6,319,483	-				-0.7
6,319,483	-				+0.2
6,319,696	-		QEN71_RS28485	0.29	-0.5
6,319,848	+		QEN71_RS28485	0.45	-1.4
6,319,848	+		QEN71_RS28485	0.45	-0.1
6,319,848	+		QEN71_RS28485	0.45	-0.2
6,319,849	-		QEN71_RS28485	0.45	-0.4
6,319,864	-		QEN71_RS28485	0.47	-1.5
6,319,864	-		QEN71_RS28485	0.47	-0.2
6,319,864	-		QEN71_RS28485	0.47	-0.4
6,319,864	-		QEN71_RS28485	0.47	-2.5
6,319,897	-		QEN71_RS28485	0.50	-1.2
6,319,938	+		QEN71_RS28485	0.54	-0.9
6,320,058	+		QEN71_RS28485	0.67	-1.8
6,320,058	+		QEN71_RS28485	0.67	-2.5
6,320,058	+		QEN71_RS28485	0.67	+0.7
6,320,058	+		QEN71_RS28485	0.67	-1.1
6,320,059	-		QEN71_RS28485	0.67	-1.6
6,320,059	-		QEN71_RS28485	0.67	-0.5
6,320,059	-		QEN71_RS28485	0.67	-1.9
6,320,059	-		QEN71_RS28485	0.67	-0.1
6,320,059	-		QEN71_RS28485	0.67	+1.9
6,320,124	+		QEN71_RS28485	0.74	-0.4
6,320,125	-		QEN71_RS28485	0.74	-0.2
6,320,125	-		QEN71_RS28485	0.74	+0.8
6,320,127	+		QEN71_RS28485	0.74	+0.0
6,320,127	+		QEN71_RS28485	0.74	+1.0
6,320,127	+		QEN71_RS28485	0.74	-1.7
6,320,127	+		QEN71_RS28485	0.74	-0.2
6,320,127	+		QEN71_RS28485	0.74	-0.2
6,320,127	+		QEN71_RS28485	0.74	-1.1
6,320,128	-		QEN71_RS28485	0.74	-0.1
6,320,128	-		QEN71_RS28485	0.74	-1.0
6,320,128	-		QEN71_RS28485	0.74	-0.1
6,320,128	-		QEN71_RS28485	0.74	-0.7
6,320,321	+				-0.7
6,320,321	+				-0.1
6,320,321	+				-1.7
6,320,321	+				+0.5
6,320,321	+				-1.7
6,320,321	+				+1.5
6,320,321	+				+1.1
6,320,321	+				-0.8
6,320,321	+				-1.1
6,320,321	+				+0.7
6,320,321	+				-0.9
6,320,321	+				-0.4
6,320,321	+				+1.3
6,320,321	+				+0.1
6,320,321	+				-0.4
6,320,321	+				+2.1
6,320,322	-				-0.4
6,320,322	-				+1.9
6,320,322	-				+0.2
6,320,322	-				-0.1
6,320,322	-				+0.6
6,320,322	-				-0.7
6,320,322	-				-0.7
6,320,322	-				-0.1
6,320,322	-				+1.2
6,320,368	-				-0.5
6,320,368	-				-0.9
6,320,473	-				-0.4
6,320,508	-				-0.2
6,320,526	-				+0.0
6,320,567	+				+1.6
6,320,568	-				+0.4
6,320,568	-				-1.4
6,320,583	+				+0.6
6,320,583	+				+0.3
6,320,583	+				-0.1
6,320,584	-				+0.0
6,320,584	-				+0.0
6,320,584	-				-0.1
6,320,621	+				+0.8
6,320,621	+				-0.2
6,320,621	+				-1.4
6,320,696	-				-0.1
6,320,696	-				+1.9
6,320,696	-				-2.1
6,320,696	-				+0.3
6,320,776	-				-0.4
6,320,776	-				+0.8
6,320,819	+				-0.2
6,320,819	+				+0.1
6,320,819	+				-0.4
6,320,820	-				+1.2
6,320,845	-				-0.2
6,320,942	+				+0.2
6,320,942	+				-0.7
6,320,942	+				+0.9
6,320,942	+				+1.5
6,320,942	+				+0.7
6,320,942	+				+0.3
6,320,942	+				-0.1
6,320,943	-				-0.1
6,320,943	-				-0.5
6,320,981	+				-0.4
6,320,981	+				-1.5
6,320,981	+				-1.1
6,320,981	+				-0.4
6,320,981	+				-1.9
6,320,981	+				-0.0
6,320,982	-				-0.8
6,320,982	-				+0.4
6,320,982	-				+0.6
6,320,982	-				-0.1
6,321,114	+		QEN71_RS28490	0.15	+0.5
6,321,114	+		QEN71_RS28490	0.15	-0.2
6,321,114	+		QEN71_RS28490	0.15	-1.0
6,321,114	+		QEN71_RS28490	0.15	-0.1
6,321,115	-		QEN71_RS28490	0.15	-0.9
6,321,115	-		QEN71_RS28490	0.15	+0.6
6,321,115	-		QEN71_RS28490	0.15	-1.1
6,321,115	-		QEN71_RS28490	0.15	-0.1
6,321,115	-		QEN71_RS28490	0.15	-1.6
6,321,177	+		QEN71_RS28490	0.19	-0.2
6,321,177	+		QEN71_RS28490	0.19	-2.5
6,321,177	+		QEN71_RS28490	0.19	-0.2
6,321,177	+		QEN71_RS28490	0.19	-0.2
6,321,177	+		QEN71_RS28490	0.19	+0.5
6,321,177	+		QEN71_RS28490	0.19	+0.1
6,321,177	+		QEN71_RS28490	0.19	-1.2
6,321,177	+		QEN71_RS28490	0.19	+0.1
6,321,177	+		QEN71_RS28490	0.19	-0.2
6,321,177	+		QEN71_RS28490	0.19	-0.9
6,321,177	+		QEN71_RS28490	0.19	-1.3
6,321,177	+		QEN71_RS28490	0.19	-0.2
6,321,178	-		QEN71_RS28490	0.19	-3.6
6,321,178	-		QEN71_RS28490	0.19	+0.3
6,321,178	-		QEN71_RS28490	0.19	+0.5
6,321,178	-		QEN71_RS28490	0.19	-0.7
6,321,178	-		QEN71_RS28490	0.19	-0.5
6,321,178	-		QEN71_RS28490	0.19	-0.2
6,321,178	-		QEN71_RS28490	0.19	+0.9
6,321,178	-		QEN71_RS28490	0.19	-0.7
6,321,366	+		QEN71_RS28490	0.33	+1.2
6,321,367	-		QEN71_RS28490	0.33	+0.3